RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLC27A3Q5K4L6 730 aa9.01□□□□□ -0.97
SCFD1-212ENST00000554486 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-212ENST00000554486 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
SCFD1-212ENST00000554486 SLC4A9Q96Q91 983 aa9.01□□□□□ -0.97
SCFD1-212ENST00000554486 CEP170BQ9Y4F5 1589 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-212ENST00000554486 PPLO60437 1756 aa9.01□□□□□ -0.97
SCFD1-212ENST00000554486 NEXMIFQ5QGS0 1516 aa9□□□□□ -0.97
SCFD1-212ENST00000554486 SLC35F4A4IF30 521 aa9□□□□□ -0.97
SCFD1-212ENST00000554486 SEC13P55735 322 aa9□□□□□ -0.97
SCFD1-212ENST00000554486 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
SCFD1-212ENST00000554486 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
SCFD1-212ENST00000554486 UHRF1BP1Q6BDS2 1440 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 M0R2N6 131 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 LGR5O75473 907 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 CSB-PGBD3P0DP91 1061 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 VSIG8P0DPA2 414 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 GMPRP36959 345 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-212ENST00000554486 ZNF326Q5BKZ1 582 aaKnown RBP8.99□□□□□ -0.97
SCFD1-212ENST00000554486 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 DCAF11Q8TEB1 546 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 ESYT1Q9BSJ8 1104 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 SERTAD1Q9UHV2 236 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 USTQ9Y2C2 406 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
SCFD1-212ENST00000554486 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 RIMS2Q9UQ26 1411 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 ARHGAP23Q9P227 1491 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 GTF2E1P29083 439 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-212ENST00000554486 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-212ENST00000554486 USP3Q9Y6I4 520 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 ERBB4Q15303 1308 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 TMEM2Q9UHN6 1383 aa8.98□□□□□ -0.97
SCFD1-212ENST00000554486 MYOM2P54296 1465 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 SLIT1O75093 1534 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 MTFR1Q15390 333 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 NBPF8Q3BBV2 869 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 ZNF295-AS1Q8N0V1 137 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 THEMISQ8N1K5 641 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-212ENST00000554486 ADGRF5Q8IZF2 1346 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 PRAG1Q86YV5 1406 aa8.97□□□□□ -0.97
SCFD1-212ENST00000554486 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.97
SCFD1-212ENST00000554486 LTKP29376 864 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 FOXK2Q01167 660 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 OCLNQ16625 522 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 PHLDB3Q6NSJ2 640 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 NANOS1Q8WY41 292 aaKnown RBP8.96□□□□□ -0.98
SCFD1-212ENST00000554486 TRAIPQ9BWF2 469 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 GRIP2Q9C0E4 1043 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-212ENST00000554486 LMTK3Q96Q04 1460 aa8.96□□□□□ -0.98
SCFD1-212ENST00000554486 C21orf2O43822 256 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 ITGA6P23229 1130 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 SMTNP53814 917 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 CENPCQ03188 943 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
SCFD1-212ENST00000554486 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
SCFD1-212ENST00000554486 A6NJY4 79 aa8.94□□□□□ -0.98
SCFD1-212ENST00000554486 SV2AQ7L0J3 742 aa8.94□□□□□ -0.98
SCFD1-212ENST00000554486 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCFD1-212ENST00000554486 SCHIP1Q9P0W5 487 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-212ENST00000554486 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
SCFD1-212ENST00000554486 SPATA31C2B4DYI2 1134 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 RHOQP17081 205 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 WEE1P30291 646 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 POU4F2Q12837 409 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 TXNDC2Q86VQ3 553 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 GMCL1Q96IK5 515 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-212ENST00000554486 TSPAN10Q9H1Z9 355 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-212ENST00000554486 PIK3C2GO75747 1445 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 TRPM1Q7Z4N2 1603 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 NRXN3Q9Y4C0 1643 aa8.93□□□□□ -0.98
SCFD1-212ENST00000554486 KIAA1210Q9ULL0 1709 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 RALGAPBQ86X10 1494 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 CDC14CA4D256 554 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 BACH1O14867 736 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 HSPA2P54652 639 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 TBCELQ5QJ74 424 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 VWA5B2Q8N398 1253 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 PRIMPOLQ96LW4 560 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 HINFPQ9BQA5 517 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 DYRK1BQ9Y463 629 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 EID1Q9Y6B2 187 aa8.92□□□□□ -0.98
SCFD1-212ENST00000554486 SETD1AO15047 1707 aaKnown RBP8.91□□□□□ -0.98
SCFD1-212ENST00000554486 POLR1AO95602 1720 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-212ENST00000554486 IQGAP1P46940 1657 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 PLEKHG1Q9ULL1 1385 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 FAM181BA6NEQ2 426 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 CDK2AP1O14519 115 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 PRMT3O60678 531 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 SSFA2P28290 1259 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms