RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 BZW2Q9Y6E2 419 aaKnown RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 LMNTD2Q8IXW0 634 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC113Q9H0I3 377 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 UNC45AQ9H3U1 944 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 KAT6BQ8WYB5 2073 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
GTF2A1-203ENST00000553612 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 FAM204AQ9H8W3 233 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 GOLGA1Q92805 767 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 TMOD4Q9NZQ9 345 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 EXOC6BQ9Y2D4 811 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 PIAS4Q8N2W9 510 aaPredicted RBP10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 USP47Q96K76 1375 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 SEC62Q99442 399 aaKnown RBP10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 CETN3O15182 167 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 B4GALNT4Q76KP1 1039 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 CCDC50Q8IVM0 306 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 ARHGAP18Q8N392 663 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 ITM2BQ9Y287 266 aa10.28□□□□□ -0.76
GTF2A1-203ENST00000553612 RAD50Q92878 1312 aa10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 IPO5O00410 1097 aaKnown RBP10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 USP48Q86UV5 1035 aa10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 TNNQ9UQP3 1299 aa10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 LGR5O75473 907 aa10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 MMADHCQ9H3L0 296 aaPredicted RBP10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 UTP6Q9NYH9 597 aaKnown RBP10.27□□□□□ -0.76
GTF2A1-203ENST00000553612 CFAP100Q494V2 611 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 MYO1BO43795 1136 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 UHMK1Q8TAS1 419 aaKnown RBP10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 MCM8Q9UJA3 840 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC88BA6NC98 1476 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 SCNN1BP51168 640 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 ANO6Q4KMQ2 910 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 MUM1L1Q5H9M0 696 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 SMARCC2Q8TAQ2 1214 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.77
GTF2A1-203ENST00000553612 KLHDC4Q8TBB5 520 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 TSGA10Q9BZW7 698 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 MYO1FO00160 1098 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SH3BP5O60239 455 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SUPT3HO75486 399 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 MYBL2P10244 700 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 ARHGAP25P42331 645 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 GNGT1P63211 74 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 NUCB1Q02818 461 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 EPC1Q9H2F5 836 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SMAPO00193 183 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 GUCY1B3Q02153 619 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 TCP11Q8WWU5 503 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SLC8A1P32418 973 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 KARSQ15046 597 aaKnown RBP10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC6Q16204 474 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 GPT2Q8TD30 523 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 GBP5Q96PP8 586 aa10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.26□□□□□ -0.77
GTF2A1-203ENST00000553612 SPATA32Q96LK8 384 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 NOB1Q9ULX3 412 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 ZNF232Q9UNY5 417 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.25□□□□□ -0.773e-7■■■□□ 19.1
GTF2A1-203ENST00000553612 MYL6BP14649 208 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 THEMIS2Q5TEJ8 643 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 FOXR1Q6PIV2 292 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 KIAA1524Q8TCG1 905 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 PNMA2Q9UL42 364 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CDC25CP30307 473 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 MTA1Q13330 715 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CRYMQ14894 314 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 FAM81BQ96LP2 452 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 FAM184BQ9ULE4 1060 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 A0A0G2JS52 829 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 KLHL33A6NCF5 533 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CUL3Q13618 768 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CAPN12Q6ZSI9 719 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 ARHGAP22Q7Z5H3 698 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CCDC170Q8IYT3 715 aa10.25□□□□□ -0.77
GTF2A1-203ENST00000553612 CENPOQ9BU64 300 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms