RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ANKRD26Q9UPS8 1709 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 DLEC1Q9Y238 1755 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
HOXB3-213ENST00000552000 DGAT1O75907 488 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 VEGFBP49765 207 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 EIF4A2Q14240 407 aaKnown RBP7.44□□□□□ -1.22
HOXB3-213ENST00000552000 NFIXQ14938 502 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 ERFEQ4G0M1 354 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 PLEKHO1Q53GL0 409 aaPredicted RBP7.44□□□□□ -1.22
HOXB3-213ENST00000552000 INTS5Q6P9B9 1019 aaKnown RBP7.44□□□□□ -1.22
HOXB3-213ENST00000552000 C2CD5Q86YS7 1000 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 ABHD8Q96I13 439 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 PRR14Q9BWN1 585 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 CARD14Q9BXL6 1004 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 TJP1Q07157 1748 aa7.44□□□□□ -1.22
HOXB3-213ENST00000552000 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
HOXB3-213ENST00000552000 FER1L6Q2WGJ9 1857 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 CASP8AP2Q9UKL3 1982 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 H0YIN7 160 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 SERPINB2P05120 415 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 DNAJC10Q8IXB1 793 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 POLKQ9UBT6 870 aa7.43□□□□□ -1.22
HOXB3-213ENST00000552000 CEP290O15078 2479 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 NRXN2Q9P2S2 1712 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 C21orf2O43822 256 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 DDNO94850 711 aaPredicted RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 HSPA8P11142 646 aaKnown RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 TNNT2P45379 298 aaPredicted RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 MTHFSP49914 203 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 SWT1Q5T5J6 900 aaKnown RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 ZNF622Q969S3 477 aaKnown RBP eCLIP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 RBM27Q9P2N5 1060 aaKnown RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 PCDHB3Q9Y5E6 796 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 SOS1Q07889 1333 aaPredicted RBP7.42□□□□□ -1.22
HOXB3-213ENST00000552000 PASKQ96RG2 1323 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 CARMIL3Q8ND23 1372 aa7.42□□□□□ -1.22
HOXB3-213ENST00000552000 SLX4Q8IY92 1834 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 CACNA1SQ13698 1873 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 ANKRD31Q8N7Z5 1873 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 FAM187AA6NFU0 413 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 CCDC85CA6NKD9 419 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 TMEM88BA6NKF7 163 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 MLLT1Q03111 559 aaPredicted RBP7.41□□□□□ -1.22
HOXB3-213ENST00000552000 C1orf141Q5JVX7 400 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 BICDL1Q6ZP65 573 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 TRIM67Q6ZTA4 783 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 LDHDQ86WU2 507 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 NARFQ9UHQ1 456 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 SCN4AP35499 1836 aa7.41□□□□□ -1.22
HOXB3-213ENST00000552000 RNF223E7ERA6 249 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 CYP19A1P11511 503 aaPredicted RBP7.4□□□□□ -1.22
HOXB3-213ENST00000552000 PRR20EP86478 221 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 PRR20CP86479 221 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 PRR20DP86480 221 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 PRR20BP86481 221 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 PRR20AP86496 221 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 AMOTQ4VCS5 1084 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 CDCA8Q53HL2 280 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.22
HOXB3-213ENST00000552000 SPRYD7Q5W111 196 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 ZNF598Q86UK7 904 aaKnown RBP7.4□□□□□ -1.22
HOXB3-213ENST00000552000 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 CCDC24Q8N4L8 307 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 TAOK3Q9H2K8 898 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 ZBTB1Q9Y2K1 713 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 COL15A1P39059 1388 aa7.4□□□□□ -1.22
HOXB3-213ENST00000552000 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
HOXB3-213ENST00000552000 COL11A2P13942 1736 aaPredicted RBP7.39□□□□□ -1.23
HOXB3-213ENST00000552000 IQCA1LA6NCM1 817 aa7.39□□□□□ -1.23
HOXB3-213ENST00000552000 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
HOXB3-213ENST00000552000 TAF1DQ9H5J8 278 aaPredicted RBP7.39□□□□□ -1.23
HOXB3-213ENST00000552000 CDHR5Q9HBB8 845 aa7.39□□□□□ -1.23
HOXB3-213ENST00000552000 CUL9Q8IWT3 2517 aa7.39□□□□□ -1.23
HOXB3-213ENST00000552000 WDR33Q9C0J8 1336 aaKnown RBP7.38□□□□□ -1.23
HOXB3-213ENST00000552000 LTBP3Q9NS15 1303 aa7.38□□□□□ -1.23
HOXB3-213ENST00000552000 RASSF10A6NK89 507 aa7.38□□□□□ -1.23
HOXB3-213ENST00000552000 CANXP27824 592 aaKnown RBP7.38□□□□□ -1.23
HOXB3-213ENST00000552000 MAP2K1Q02750 393 aaPredicted RBP7.38□□□□□ -1.23
HOXB3-213ENST00000552000 DEFB115Q30KQ5 88 aa7.38□□□□□ -1.23
HOXB3-213ENST00000552000 ZNF697Q5TEC3 545 aa7.38□□□□□ -1.23
HOXB3-213ENST00000552000 PDE6BP35913 854 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 RGS19P49795 217 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 TBC1D9BQ66K14 1250 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 MAP1SQ66K74 1059 aaPredicted RBP7.37□□□□□ -1.23
HOXB3-213ENST00000552000 PRR5LQ6MZQ0 368 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 ANKLE1Q8NAG6 615 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 CFAP44Q96MT7 982 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 BRIP1Q9BX63 1249 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 SLC52A2Q9HAB3 445 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 HACL1Q9UJ83 578 aa7.37□□□□□ -1.23
HOXB3-213ENST00000552000 ABT1Q9ULW3 272 aaKnown RBP7.37□□□□□ -1.23
HOXB3-213ENST00000552000 KIAA0100Q14667 2235 aaKnown RBP7.36□□□□□ -1.23
HOXB3-213ENST00000552000 ZNF541Q9H0D2 1346 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 TNFRSF10AO00220 468 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 GRM1Q13255 1194 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms