RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-225ENST00000550715 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
LETMD1-225ENST00000550715 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
LETMD1-225ENST00000550715 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
LETMD1-225ENST00000550715 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-225ENST00000550715 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
LETMD1-225ENST00000550715 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
LETMD1-225ENST00000550715 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-225ENST00000550715 USP19O94966 1318 aa11.19□□□□□ -0.62
LETMD1-225ENST00000550715 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
LETMD1-225ENST00000550715 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
LETMD1-225ENST00000550715 USP6P35125 1406 aa11.18□□□□□ -0.62
LETMD1-225ENST00000550715 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
LETMD1-225ENST00000550715 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
LETMD1-225ENST00000550715 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
LETMD1-225ENST00000550715 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
LETMD1-225ENST00000550715 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
LETMD1-225ENST00000550715 GGCXP38435 758 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-225ENST00000550715 TULP4Q9NRJ4 1543 aa11.17□□□□□ -0.62
LETMD1-225ENST00000550715 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-225ENST00000550715 ACEP12821 1306 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-225ENST00000550715 MLLT1Q03111 559 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-225ENST00000550715 SH3RF1Q7Z6J0 888 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-225ENST00000550715 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
LETMD1-225ENST00000550715 TUBGCP6Q96RT7 1819 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 FOXN1O15353 648 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 ATP9BO43861 1147 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 SH3BP2P78314 561 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 TRIM32Q13049 653 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 DZIP3Q86Y13 1208 aaKnown RBP11.15□□□□□ -0.62
LETMD1-225ENST00000550715 RETREG2Q8NC44 543 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
LETMD1-225ENST00000550715 CEP126Q9P2H0 1117 aa11.15□□□□□ -0.62
LETMD1-225ENST00000550715 QSER1Q2KHR3 1735 aa11.15□□□□□ -0.63
LETMD1-225ENST00000550715 BTAF1O14981 1849 aa11.14□□□□□ -0.63
LETMD1-225ENST00000550715 SKIP12755 728 aa11.14□□□□□ -0.63
LETMD1-225ENST00000550715 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
LETMD1-225ENST00000550715 NHSQ6T4R5 1651 aa11.14□□□□□ -0.63
LETMD1-225ENST00000550715 SPATA31E1Q6ZUB1 1445 aa11.13□□□□□ -0.63
LETMD1-225ENST00000550715 SLFNL1Q499Z3 407 aa11.13□□□□□ -0.63
LETMD1-225ENST00000550715 ABHD8Q96I13 439 aa11.13□□□□□ -0.63
LETMD1-225ENST00000550715 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
LETMD1-225ENST00000550715 RGS19P49795 217 aa11.12□□□□□ -0.63
LETMD1-225ENST00000550715 RNF135Q8IUD6 432 aa11.12□□□□□ -0.63
LETMD1-225ENST00000550715 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
LETMD1-225ENST00000550715 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
LETMD1-225ENST00000550715 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 SKOR1P84550 965 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 SLC10A4Q96EP9 437 aa11.11□□□□□ -0.63
LETMD1-225ENST00000550715 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
LETMD1-225ENST00000550715 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
LETMD1-225ENST00000550715 COL18A1P39060 1754 aa11.09□□□□□ -0.63
LETMD1-225ENST00000550715 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
LETMD1-225ENST00000550715 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
LETMD1-225ENST00000550715 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
LETMD1-225ENST00000550715 CDK19Q9BWU1 502 aa11.09□□□□□ -0.63
LETMD1-225ENST00000550715 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
LETMD1-225ENST00000550715 C9orf131Q5VYM1 1079 aa11.08□□□□□ -0.64
LETMD1-225ENST00000550715 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
LETMD1-225ENST00000550715 PDE4DIPQ5VU43 2346 aa11.07□□□□□ -0.64
LETMD1-225ENST00000550715 CCDC85CA6NKD9 419 aa11.07□□□□□ -0.64
LETMD1-225ENST00000550715 PHTF2Q8N3S3 785 aa11.07□□□□□ -0.64
LETMD1-225ENST00000550715 PLPP7Q8NBV4 271 aa11.07□□□□□ -0.64
LETMD1-225ENST00000550715 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
LETMD1-225ENST00000550715 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
LETMD1-225ENST00000550715 BCS1LQ9Y276 419 aa11.07□□□□□ -0.64
LETMD1-225ENST00000550715 KCPQ6ZWJ8 1503 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 LBX1P52954 281 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 RAB15P59190 212 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 NCOA4Q13772 614 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 ARHGEF25Q86VW2 580 aa11.06□□□□□ -0.64
LETMD1-225ENST00000550715 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
LETMD1-225ENST00000550715 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
LETMD1-225ENST00000550715 RPIAP49247 311 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms