RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
TROAP-211ENST00000549891 THSD7BQ9C0I4 1608 aa17.72■□□□□ 0.43
TROAP-211ENST00000549891 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
TROAP-211ENST00000549891 CHL1O00533 1208 aa17.71■□□□□ 0.43
TROAP-211ENST00000549891 TNIP1Q15025 636 aa17.71■□□□□ 0.43
TROAP-211ENST00000549891 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
TROAP-211ENST00000549891 BEGAINQ9BUH8 593 aa17.71■□□□□ 0.43
TROAP-211ENST00000549891 LAS1LQ9Y4W2 734 aaKnown RBP17.71■□□□□ 0.43
TROAP-211ENST00000549891 LRRC37AA6NMS7 1700 aa17.7■□□□□ 0.42
TROAP-211ENST00000549891 DDX60Q8IY21 1712 aaKnown RBP17.7■□□□□ 0.42
TROAP-211ENST00000549891 HOXB7P09629 217 aa17.7■□□□□ 0.42
TROAP-211ENST00000549891 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
TROAP-211ENST00000549891 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
TROAP-211ENST00000549891 CAPNS2Q96L46 248 aa17.7■□□□□ 0.42
TROAP-211ENST00000549891 GMPSP49915 693 aaPredicted RBP17.69■□□□□ 0.42
TROAP-211ENST00000549891 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
TROAP-211ENST00000549891 TLL2Q9Y6L7 1015 aa17.69■□□□□ 0.42
TROAP-211ENST00000549891 TRAF5O00463 557 aa17.68■□□□□ 0.42
TROAP-211ENST00000549891 HSPA8P11142 646 aaKnown RBP17.68■□□□□ 0.42
TROAP-211ENST00000549891 CST9Q5W186 159 aa17.68■□□□□ 0.42
TROAP-211ENST00000549891 ANKRD13DQ6ZTN6 518 aa17.68■□□□□ 0.42
TROAP-211ENST00000549891 ZC3H15Q8WU90 426 aaKnown RBP17.68■□□□□ 0.42
TROAP-211ENST00000549891 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
TROAP-211ENST00000549891 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
TROAP-211ENST00000549891 GRM1Q13255 1194 aa17.67■□□□□ 0.42
TROAP-211ENST00000549891 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
TROAP-211ENST00000549891 CYP4F22Q6NT55 531 aa17.67■□□□□ 0.42
TROAP-211ENST00000549891 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
TROAP-211ENST00000549891 RAD17O75943 681 aa17.66■□□□□ 0.42
TROAP-211ENST00000549891 MAP2K2P36507 400 aa17.66■□□□□ 0.42
TROAP-211ENST00000549891 HYPKQ9NX55 129 aa17.66■□□□□ 0.42
TROAP-211ENST00000549891 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
TROAP-211ENST00000549891 H7C1D1 291 aa17.65■□□□□ 0.42
TROAP-211ENST00000549891 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
TROAP-211ENST00000549891 HHIPL1Q96JK4 782 aa17.65■□□□□ 0.42
TROAP-211ENST00000549891 ISCA1Q9BUE6 129 aa17.65■□□□□ 0.42
TROAP-211ENST00000549891 DUOX1Q9NRD9 1551 aa17.65■□□□□ 0.42
TROAP-211ENST00000549891 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
TROAP-211ENST00000549891 SF3B3Q15393 1217 aaKnown RBP17.64■□□□□ 0.41
TROAP-211ENST00000549891 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
TROAP-211ENST00000549891 CDC37L1Q7L3B6 337 aa17.64■□□□□ 0.41
TROAP-211ENST00000549891 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
TROAP-211ENST00000549891 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
TROAP-211ENST00000549891 CFAP44Q96MT7 982 aa17.64■□□□□ 0.41
TROAP-211ENST00000549891 CNOT7Q9UIV1 285 aaKnown RBP17.64■□□□□ 0.41
TROAP-211ENST00000549891 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
TROAP-211ENST00000549891 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
TROAP-211ENST00000549891 GLIS2Q9BZE0 524 aaPredicted RBP17.63■□□□□ 0.41
TROAP-211ENST00000549891 YDJCA8MPS7 323 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 ATP5J2-PTCD1G3V325 749 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 CA12O43570 354 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
TROAP-211ENST00000549891 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 MICALL2Q8IY33 904 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 DPF2Q92785 391 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 EYA3Q99504 573 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 ZNF408Q9H9D4 720 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
TROAP-211ENST00000549891 POLR2AP24928 1970 aaKnown RBP17.61■□□□□ 0.41
TROAP-211ENST00000549891 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
TROAP-211ENST00000549891 HIRAP54198 1017 aaPredicted RBP17.61■□□□□ 0.41
TROAP-211ENST00000549891 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
TROAP-211ENST00000549891 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
TROAP-211ENST00000549891 ABHD8Q96I13 439 aa17.61■□□□□ 0.41
TROAP-211ENST00000549891 IRS4O14654 1257 aaPredicted RBP17.6■□□□□ 0.41
TROAP-211ENST00000549891 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
TROAP-211ENST00000549891 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
TROAP-211ENST00000549891 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
TROAP-211ENST00000549891 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
TROAP-211ENST00000549891 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
TROAP-211ENST00000549891 PSMD14O00487 310 aa17.59■□□□□ 0.41
TROAP-211ENST00000549891 AOC2O75106 756 aa17.59■□□□□ 0.41
TROAP-211ENST00000549891 RPS8P62241 208 aaKnown RBP17.59■□□□□ 0.41
TROAP-211ENST00000549891 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
TROAP-211ENST00000549891 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
TROAP-211ENST00000549891 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
TROAP-211ENST00000549891 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
TROAP-211ENST00000549891 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
TROAP-211ENST00000549891 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
TROAP-211ENST00000549891 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
TROAP-211ENST00000549891 GPSM2P81274 684 aa17.58■□□□□ 0.4
TROAP-211ENST00000549891 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
TROAP-211ENST00000549891 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
TROAP-211ENST00000549891 ECE2O60344 883 aa17.57■□□□□ 0.4
TROAP-211ENST00000549891 GNAI1P63096 354 aa17.57■□□□□ 0.4
TROAP-211ENST00000549891 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
TROAP-211ENST00000549891 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
TROAP-211ENST00000549891 SHTN1A0MZ66 631 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 G3V3G9 751 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 NOGQ13253 232 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms