RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 C11orf57Q6ZUT1 292 aaPredicted RBP16.71■□□□□ 0.27
SRP54-202ENST00000546080 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 FSD1Q9BTV5 496 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
SRP54-202ENST00000546080 BECN2A8MW95 431 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 BRF1Q92994 677 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
SRP54-202ENST00000546080 CCDC69A6NI79 296 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 CTAGE5O15320 804 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 JAK2O60674 1132 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 ANXA1P04083 346 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
SRP54-202ENST00000546080 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRP54-202ENST00000546080 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
SRP54-202ENST00000546080 V9GYY5 206 aaPredicted RBP16.7■□□□□ 0.26
SRP54-202ENST00000546080 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 ADAMTS13Q76LX8 1427 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 TERF2Q15554 542 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 GTF3C6Q969F1 213 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 MED23Q9ULK4 1368 aa16.69■□□□□ 0.26
SRP54-202ENST00000546080 NLRP6P59044 892 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 FILIP1Q7Z7B0 1213 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
SRP54-202ENST00000546080 TRMT1Q9NXH9 659 aaKnown RBP16.68■□□□□ 0.26
SRP54-202ENST00000546080 CCZ1BP86790 482 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
SRP54-202ENST00000546080 ELF2Q15723 593 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
SRP54-202ENST00000546080 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 SLU7O95391 586 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■□□□ 11.8
SRP54-202ENST00000546080 KRT32Q14532 448 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 CEBPZQ03701 1054 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
SRP54-202ENST00000546080 MAP3K2Q9Y2U5 619 aa16.67■□□□□ 0.26
SRP54-202ENST00000546080 JCADQ9P266 1359 aa16.66■□□□□ 0.26
SRP54-202ENST00000546080 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
SRP54-202ENST00000546080 SASH1O94885 1247 aa16.66■□□□□ 0.26
SRP54-202ENST00000546080 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
SRP54-202ENST00000546080 ZNF589Q86UQ0 364 aaPredicted RBP16.66■□□□□ 0.26
SRP54-202ENST00000546080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
SRP54-202ENST00000546080 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
SRP54-202ENST00000546080 FAM53CQ9NYF3 392 aa16.65■□□□□ 0.26
SRP54-202ENST00000546080 TLR7Q9NYK1 1049 aaKnown RBP16.65■□□□□ 0.26
SRP54-202ENST00000546080 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
SRP54-202ENST00000546080 GSDMDP57764 484 aa16.65■□□□□ 0.26
SRP54-202ENST00000546080 DHX40Q8IX18 779 aaKnown RBP16.65■□□□□ 0.26
SRP54-202ENST00000546080 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
SRP54-202ENST00000546080 DBF4Q9UBU7 674 aaPredicted RBP16.65■□□□□ 0.26
SRP54-202ENST00000546080 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
SRP54-202ENST00000546080 KCNQ3O43525 872 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
SRP54-202ENST00000546080 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
SRP54-202ENST00000546080 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
SRP54-202ENST00000546080 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 Q6ZUG5 572 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 CEP57L1Q8IYX8 460 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 GOLPH3LQ9H4A5 285 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 LGR6Q9HBX8 967 aa16.64■□□□□ 0.25
SRP54-202ENST00000546080 TAF5LO75529 589 aa16.63■□□□□ 0.25
SRP54-202ENST00000546080 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
SRP54-202ENST00000546080 TNRQ92752 1358 aa16.63■□□□□ 0.25
SRP54-202ENST00000546080 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 TEFQ10587 303 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
SRP54-202ENST00000546080 USPL1Q5W0Q7 1092 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
SRP54-202ENST00000546080 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 ERBB3P21860 1342 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
SRP54-202ENST00000546080 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
SRP54-202ENST00000546080 A0A087WWV3 80 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
SRP54-202ENST00000546080 FOSBP53539 338 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
SRP54-202ENST00000546080 SIL1Q9H173 461 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 GRM8O00222 908 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 FAM193AP78312 1265 aa16.61■□□□□ 0.25
SRP54-202ENST00000546080 FGD1P98174 961 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms