RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DPEP1P16444 411 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 KCNA3P22001 575 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 DDX46Q7L014 1031 aaKnown RBP14.74□□□□□ -0.05
SNHG1-221ENST00000544983 TMC4Q7Z404 712 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 TTLL6Q8N841 843 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 TTLL11Q8NHH1 800 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 TNNQ9UQP3 1299 aa14.74□□□□□ -0.05
SNHG1-221ENST00000544983 DDX60Q8IY21 1712 aaKnown RBP14.74□□□□□ -0.05
SNHG1-221ENST00000544983 MYH3P11055 1940 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-221ENST00000544983 BBOX1O75936 387 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 GNAI2P04899 355 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 CHRNA5P30532 468 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 AAMPQ13685 434 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 JARID2Q92833 1246 aaPredicted RBP14.73□□□□□ -0.05
SNHG1-221ENST00000544983 ZNF622Q969S3 477 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNHG1-221ENST00000544983 MEIS3Q99687 375 aa14.73□□□□□ -0.05
SNHG1-221ENST00000544983 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
SNHG1-221ENST00000544983 FOXO4P98177 505 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 RABL6Q3YEC7 729 aaPredicted RBP14.72□□□□□ -0.05
SNHG1-221ENST00000544983 GRIPAP1Q4V328 841 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 DALRD3Q5D0E6 543 aaKnown RBP14.72□□□□□ -0.05
SNHG1-221ENST00000544983 NLGN2Q8NFZ4 835 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 SUCLG2Q96I99 432 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 CDC5LQ99459 802 aaKnown RBP14.72□□□□□ -0.05
SNHG1-221ENST00000544983 COG6Q9Y2V7 657 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 DLEC1Q9Y238 1755 aa14.72□□□□□ -0.05
SNHG1-221ENST00000544983 IFIT5Q13325 482 aaKnown RBP14.71□□□□□ -0.05
SNHG1-221ENST00000544983 GRAPQ13588 217 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 SOGA3Q5TF21 947 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.05
SNHG1-221ENST00000544983 TMX4Q9H1E5 349 aaPredicted RBP14.71□□□□□ -0.05
SNHG1-221ENST00000544983 BICC1Q9H694 974 aaKnown RBP14.71□□□□□ -0.05
SNHG1-221ENST00000544983 KIAA1551Q9HCM1 1747 aa14.71□□□□□ -0.05
SNHG1-221ENST00000544983 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.06
SNHG1-221ENST00000544983 MTX1Q13505 466 aa14.7□□□□□ -0.06
SNHG1-221ENST00000544983 CCDC57Q2TAC2 916 aa14.7□□□□□ -0.06
SNHG1-221ENST00000544983 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
SNHG1-221ENST00000544983 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
SNHG1-221ENST00000544983 ANKRD18BA2A2Z9 1011 aa14.69□□□□□ -0.06
SNHG1-221ENST00000544983 RPS8P62241 208 aaKnown RBP14.69□□□□□ -0.06
SNHG1-221ENST00000544983 PRPF40BQ6NWY9 871 aaKnown RBP14.69□□□□□ -0.06
SNHG1-221ENST00000544983 GREM2Q9H772 168 aa14.69□□□□□ -0.06
SNHG1-221ENST00000544983 ZBTB40Q9NUA8 1239 aa14.69□□□□□ -0.06
SNHG1-221ENST00000544983 LRRFIP2Q9Y608 721 aaKnown RBP14.69□□□□□ -0.06
SNHG1-221ENST00000544983 BRCA1P38398 1863 aaKnown RBP14.69□□□□□ -0.06
SNHG1-221ENST00000544983 COL11A2P13942 1736 aaPredicted RBP14.69□□□□□ -0.06
SNHG1-221ENST00000544983 ITGA6P23229 1130 aa14.68□□□□□ -0.06
SNHG1-221ENST00000544983 EPHA10Q5JZY3 1008 aa14.68□□□□□ -0.06
SNHG1-221ENST00000544983 ANKRD18AQ8IVF6 992 aa14.68□□□□□ -0.06
SNHG1-221ENST00000544983 ANKRD44Q8N8A2 993 aa14.68□□□□□ -0.06
SNHG1-221ENST00000544983 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
SNHG1-221ENST00000544983 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 SP8Q8IXZ3 490 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 BSDC1Q9NW68 430 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-221ENST00000544983 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 BCS1LQ9Y276 419 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
SNHG1-221ENST00000544983 PPEF1O14829 653 aaPredicted RBP14.66□□□□□ -0.06
SNHG1-221ENST00000544983 TAF7LQ5H9L4 462 aa14.66□□□□□ -0.06
SNHG1-221ENST00000544983 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
SNHG1-221ENST00000544983 C7orf43Q8WVR3 580 aa14.66□□□□□ -0.06
SNHG1-221ENST00000544983 MPHOSPH8Q99549 860 aa14.66□□□□□ -0.06
SNHG1-221ENST00000544983 ATP6V0A2Q9Y487 856 aa14.66□□□□□ -0.06
SNHG1-221ENST00000544983 ARFGEF1Q9Y6D6 1849 aa14.65□□□□□ -0.06
SNHG1-221ENST00000544983 GPR162Q16538 588 aa14.65□□□□□ -0.06
SNHG1-221ENST00000544983 RTKN2Q8IZC4 609 aa14.65□□□□□ -0.06
SNHG1-221ENST00000544983 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
SNHG1-221ENST00000544983 SEC31BQ9NQW1 1179 aa14.65□□□□□ -0.06
SNHG1-221ENST00000544983 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
SNHG1-221ENST00000544983 HMMRO75330 724 aa14.64□□□□□ -0.07
SNHG1-221ENST00000544983 ATP8B2P98198 1209 aa14.64□□□□□ -0.07
SNHG1-221ENST00000544983 CCDC93Q567U6 631 aa14.64□□□□□ -0.07
SNHG1-221ENST00000544983 CELF1Q92879 486 aaKnown RBP14.64□□□□□ -0.07
SNHG1-221ENST00000544983 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
SNHG1-221ENST00000544983 C21orf2O43822 256 aa14.63□□□□□ -0.07
SNHG1-221ENST00000544983 LDHAL6AQ6ZMR3 332 aa14.63□□□□□ -0.07
SNHG1-221ENST00000544983 SSH3Q8TE77 659 aa14.63□□□□□ -0.07
SNHG1-221ENST00000544983 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
SNHG1-221ENST00000544983 CEP85Q6P2H3 762 aa14.62□□□□□ -0.07
SNHG1-221ENST00000544983 CRBNQ96SW2 442 aa14.62□□□□□ -0.07
SNHG1-221ENST00000544983 ANKRD2Q9GZV1 360 aa14.62□□□□□ -0.07
SNHG1-221ENST00000544983 LTBP3Q9NS15 1303 aa14.62□□□□□ -0.07
SNHG1-221ENST00000544983 CIAO1O76071 339 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNHG1-221ENST00000544983 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
SNHG1-221ENST00000544983 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
SNHG1-221ENST00000544983 POLA2Q14181 598 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
SNHG1-221ENST00000544983 SUPT20HQ8NEM7 779 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 PSMD1Q99460 953 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 VPS33BQ9H267 617 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 CNNM1Q9NRU3 951 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 MROH5Q6ZUA9 1318 aa14.61□□□□□ -0.07
SNHG1-221ENST00000544983 HSP90AB4PQ58FF6 505 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms