RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 TAF1P21675 1872 aa24.45■■□□□ 1.5
SDR39U1-203ENST00000544691 CTSWP56202 376 aa24.45■■□□□ 1.5
SDR39U1-203ENST00000544691 IPO8O15397 1037 aaKnown RBP24.44■■□□□ 1.5
SDR39U1-203ENST00000544691 NBPF7P0C2Y1 421 aaPredicted RBP24.44■■□□□ 1.5
SDR39U1-203ENST00000544691 ATF7IPQ6VMQ6 1270 aa24.44■■□□□ 1.5
SDR39U1-203ENST00000544691 TTLL11Q8NHH1 800 aa24.43■■□□□ 1.5
SDR39U1-203ENST00000544691 CLUAP1Q96AJ1 413 aa24.43■■□□□ 1.5
SDR39U1-203ENST00000544691 PLA2G12BQ9BX93 195 aa24.43■■□□□ 1.5
SDR39U1-203ENST00000544691 SEC31BQ9NQW1 1179 aa24.43■■□□□ 1.5
SDR39U1-203ENST00000544691 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 RASSF7Q02833 373 aa24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 CCDC152Q4G0S7 254 aa24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 ZKSCAN2Q63HK3 967 aa24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 CELF1Q92879 486 aaKnown RBP24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 RCAN3Q9UKA8 241 aa24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 MYH3P11055 1940 aa24.42■■□□□ 1.5
SDR39U1-203ENST00000544691 NFKBIEO00221 500 aa24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 CCT4P50991 539 aaKnown RBP24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 GRAPQ13588 217 aa24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 USP44Q9H0E7 712 aa24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 UTYO14607 1347 aa24.41■■□□□ 1.5
SDR39U1-203ENST00000544691 EPHA10Q5JZY3 1008 aa24.4■■□□□ 1.5
SDR39U1-203ENST00000544691 GREM2Q9H772 168 aa24.4■■□□□ 1.5
SDR39U1-203ENST00000544691 FOXO4P98177 505 aa24.4■■□□□ 1.5
SDR39U1-203ENST00000544691 CHD4Q14839 1912 aa24.39■■□□□ 1.5
SDR39U1-203ENST00000544691 CCDC93Q567U6 631 aa24.39■■□□□ 1.49
SDR39U1-203ENST00000544691 SUCLG2Q96I99 432 aa24.39■■□□□ 1.49
SDR39U1-203ENST00000544691 BBOX1O75936 387 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 PRELPP51888 382 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 FAM161AQ3B820 660 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 SOGA3Q5TF21 947 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 INTS3Q68E01 1043 aaKnown RBP24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 KAZALD1Q96I82 304 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 SNED1Q8TER0 1413 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
SDR39U1-203ENST00000544691 CSF1RP07333 972 aa24.37■■□□□ 1.49
SDR39U1-203ENST00000544691 ATP6V0A2Q9Y487 856 aa24.37■■□□□ 1.49
SDR39U1-203ENST00000544691 RLBP1P12271 317 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 RPS8P62241 208 aaKnown RBP24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 RTL9Q8NET4 1388 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 LMBR1LQ6UX01 489 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 TMEM57Q8N5G2 664 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 MEIS3Q99687 375 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 TAOK3Q9H2K8 898 aa24.35■■□□□ 1.49
SDR39U1-203ENST00000544691 ITGA6P23229 1130 aa24.34■■□□□ 1.49
SDR39U1-203ENST00000544691 BICC1Q9H694 974 aaKnown RBP24.34■■□□□ 1.49
SDR39U1-203ENST00000544691 CHMP3Q9Y3E7 222 aa24.34■■□□□ 1.49
SDR39U1-203ENST00000544691 PLIN1O60240 522 aa24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 CC2D2BQ6DHV5 1058 aa24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 SP8Q8IXZ3 490 aa24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 RTKN2Q8IZC4 609 aa24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 LTBP3Q9NS15 1303 aa24.33■■□□□ 1.49
SDR39U1-203ENST00000544691 SBF1O95248 1867 aa24.33■■□□□ 1.48
SDR39U1-203ENST00000544691 YY1P25490 414 aa24.32■■□□□ 1.48
SDR39U1-203ENST00000544691 C9orf131Q5VYM1 1079 aa24.32■■□□□ 1.48
SDR39U1-203ENST00000544691 DZIP1LQ8IYY4 767 aaKnown RBP24.32■■□□□ 1.48
SDR39U1-203ENST00000544691 CDC5LQ99459 802 aaKnown RBP24.32■■□□□ 1.48
SDR39U1-203ENST00000544691 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
SDR39U1-203ENST00000544691 FKBP4Q02790 459 aaKnown RBP eCLIP24.31■■□□□ 1.48
SDR39U1-203ENST00000544691 ANKRD18AQ8IVF6 992 aa24.31■■□□□ 1.48
SDR39U1-203ENST00000544691 RNF181Q9P0P0 153 aa24.31■■□□□ 1.48
SDR39U1-203ENST00000544691 UBTFL1P0CB47 393 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 LMNB1P20700 586 aa24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 TMC4Q7Z404 712 aa24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 ANKRD44Q8N8A2 993 aa24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 RABL6Q3YEC7 729 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 PANK1Q8TE04 598 aa24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 TMX4Q9H1E5 349 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 ZNF277Q9NRM2 450 aaPredicted RBP24.3■■□□□ 1.48
SDR39U1-203ENST00000544691 PSMD1Q99460 953 aa24.29■■□□□ 1.48
SDR39U1-203ENST00000544691 SPEF2Q9C093 1822 aa24.29■■□□□ 1.48
SDR39U1-203ENST00000544691 ANKRD18BA2A2Z9 1011 aa24.28■■□□□ 1.48
SDR39U1-203ENST00000544691 IFIT5Q13325 482 aaKnown RBP24.28■■□□□ 1.48
SDR39U1-203ENST00000544691 LRRFIP2Q9Y608 721 aaKnown RBP24.28■■□□□ 1.48
SDR39U1-203ENST00000544691 CCDC88AQ3V6T2 1871 aa24.28■■□□□ 1.48
SDR39U1-203ENST00000544691 DPP8Q6V1X1 898 aaPredicted RBP24.27■■□□□ 1.48
SDR39U1-203ENST00000544691 ITPRIPQ8IWB1 547 aa24.27■■□□□ 1.48
SDR39U1-203ENST00000544691 MPNDQ8N594 471 aa24.27■■□□□ 1.48
SDR39U1-203ENST00000544691 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
SDR39U1-203ENST00000544691 GPSM2P81274 684 aa24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 CCDC57Q2TAC2 916 aa24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 GRIPAP1Q4V328 841 aa24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 ZNF594Q96JF6 807 aaPredicted RBP24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 BSDC1Q9NW68 430 aaPredicted RBP24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 NSFL1CQ9UNZ2 370 aaKnown RBP24.26■■□□□ 1.47
SDR39U1-203ENST00000544691 IGHMBP2P38935 993 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-203ENST00000544691 LTBP1Q14766 1721 aa24.25■■□□□ 1.47
SDR39U1-203ENST00000544691 GNAI3P08754 354 aa24.25■■□□□ 1.47
SDR39U1-203ENST00000544691 IARSP41252 1262 aaKnown RBP24.24■■□□□ 1.47
SDR39U1-203ENST00000544691 MPHOSPH8Q99549 860 aa24.24■■□□□ 1.47
SDR39U1-203ENST00000544691 RTFDC1Q9BY42 306 aaPredicted RBP24.24■■□□□ 1.47
SDR39U1-203ENST00000544691 MINPP1Q9UNW1 487 aa24.24■■□□□ 1.47
SDR39U1-203ENST00000544691 C20orf194Q5TEA3 1177 aa24.23■■□□□ 1.47
SDR39U1-203ENST00000544691 ANKIB1Q9P2G1 1089 aa24.23■■□□□ 1.47
SDR39U1-203ENST00000544691 COL4A5P29400 1685 aa24.23■■□□□ 1.47
SDR39U1-203ENST00000544691 TIAM2Q8IVF5 1701 aa24.22■■□□□ 1.47
SDR39U1-203ENST00000544691 TAF7LQ5H9L4 462 aa24.22■■□□□ 1.47
SDR39U1-203ENST00000544691 POLLQ9UGP5 575 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms