RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TRAK2O60296 914 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 MNS1Q8NEH6 495 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 DEF6Q9H4E7 631 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 TMEM94Q12767 1356 aa8.01□□□□□ -1.13
SRGAP1-206ENST00000543397 RGL2O15211 777 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 TSPY3P0CV98 308 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 TSPY8P0CW00 308 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 PLCG2P16885 1265 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 NCOA7Q8NI08 942 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 SH3TC1Q8TE82 1336 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 CAGE1Q8TC20 777 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 TSPY26PQ9H489 355 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 DESP17661 470 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 DHX8Q14562 1220 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 MICU3Q86XE3 530 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 TMEM87AQ8NBN3 555 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 PAIP2Q9BPZ3 127 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 DNAI2Q9GZS0 605 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC39Q9UFE4 941 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 BAG4O95429 457 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 NASPP49321 788 aaPredicted RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 NFKBIBQ15653 356 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 SLC9C2Q5TAH2 1124 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 PPFIBP1Q86W92 1011 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 HELBQ8NG08 1087 aaPredicted RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 PHACTR3Q96KR7 559 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 CARD14Q9BXL6 1004 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 IARSP41252 1262 aaKnown RBP8□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC178Q5BJE1 867 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 PRDM16Q9HAZ2 1276 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 SLC4A4Q9Y6R1 1079 aa8□□□□□ -1.13
SRGAP1-206ENST00000543397 ESR2Q92731 530 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 SECISBP2LQ93073 1101 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 SOS1Q07889 1333 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 RUFY1Q96T51 708 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC87Q9NVE4 849 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 GJA3Q9Y6H8 435 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 DNMT1P26358 1616 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 ARHGEF12Q9NZN5 1544 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 TNNI2P48788 182 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 NOM1Q5C9Z4 860 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 HMG20BQ9P0W2 317 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 TRPC5Q9UL62 973 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 CFAP74Q9C0B2 1584 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 PLEKHG3A1L390 1219 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 H0YIN7 160 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 CCT2P78371 535 aaKnown RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 TSHZ3Q63HK5 1081 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 MAPKBP1O60336 1514 aa7.99□□□□□ -1.13
SRGAP1-206ENST00000543397 CDR1P51861 262 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 PRPF38AQ8NAV1 312 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 KRT23Q9C075 422 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 UBA5Q9GZZ9 404 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 LIMCH1Q9UPQ0 1083 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 CFAP43Q8NDM7 1665 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 LDHBP07195 334 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 GUCY1B3Q02153 619 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 NAP1L4Q99733 375 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 NUP62CLQ9H1M0 184 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 SEPT11Q9NVA2 429 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 MYO6Q9UM54 1294 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 SAMM50Q9Y512 469 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 MCM5P33992 734 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 METAP2P50579 478 aaKnown RBP eCLIP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 ATP8B2P98198 1209 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 TRMT1LQ7Z2T5 733 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 TXLNBQ8N3L3 684 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 FAM89AQ96GI7 184 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 NEK1Q96PY6 1258 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 WTAPQ15007 396 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 UFL1O94874 794 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 KRT24Q2M2I5 525 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 SLC52A2Q9HAB3 445 aa7.98□□□□□ -1.13
SRGAP1-206ENST00000543397 ADGRL2O95490 1459 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 MRE11P49959 708 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 PLBD2Q8NHP8 589 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 QTRT2Q9H974 415 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 PA2G4Q9UQ80 394 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 NPHP4O75161 1426 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 CFAP65Q6ZU64 1925 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 MAGEB6P1A0A0J9YX57 407 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 KIF20AO95235 890 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 BMP2KLQ5H9B9 411 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 TAF3Q5VWG9 929 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 DNAJC10Q8IXB1 793 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 TMTC2Q8N394 836 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 SCAND2PQ9GZW5 306 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms