RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
AC005840.3-201ENST00000541888 PIGBQ92521 554 aa9.82□□□□□ -0.84
AC005840.3-201ENST00000541888 USP16Q9Y5T5 823 aa9.82□□□□□ -0.84
AC005840.3-201ENST00000541888 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 UBR2Q8IWV8 1755 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 KCNQ4P56696 695 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 KCNC4Q03721 635 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 PDE3AQ14432 1141 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 MVPQ14764 893 aaKnown RBP9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 TTC5Q8N0Z6 440 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 FNBP4Q8N3X1 1017 aaPredicted RBP9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 PAPPAQ13219 1627 aa9.81□□□□□ -0.84
AC005840.3-201ENST00000541888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 SLC4A3P48751 1232 aa9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 STK31Q9BXU1 1019 aa9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 TMOD3Q9NYL9 352 aa9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
AC005840.3-201ENST00000541888 IGHDP01880 384 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 FLIIQ13045 1269 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 VPS72Q15906 364 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 CCDC30Q5VVM6 783 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 BRWD3Q6RI45 1802 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 TJAP1Q5JTD0 557 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 ERICH6BQ5W0A0 696 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 CACNA1FO60840 1977 aa9.79□□□□□ -0.84
AC005840.3-201ENST00000541888 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 ABCC4O15439 1325 aa9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 IPO8O15397 1037 aaKnown RBP9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 ATG3Q9NT62 314 aa9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 LAMB4A4D0S4 1761 aa9.78□□□□□ -0.84
AC005840.3-201ENST00000541888 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.84
AC005840.3-201ENST00000541888 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.84
AC005840.3-201ENST00000541888 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.84
AC005840.3-201ENST00000541888 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.84
AC005840.3-201ENST00000541888 QTRT2Q9H974 415 aaKnown RBP9.77□□□□□ -0.84
AC005840.3-201ENST00000541888 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 THSD7AQ9UPZ6 1657 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 A1BGP04217 495 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 MEIS3Q99687 375 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 BABAM1Q9NWV8 329 aa9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.85
AC005840.3-201ENST00000541888 BCL9O00512 1426 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 PI4KAP2A4QPH2 592 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 SMIM5Q71RC9 77 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 PI4KAP1Q8N8J0 262 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 MTRQ99707 1265 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 ADCY9O60503 1353 aa9.76□□□□□ -0.85
AC005840.3-201ENST00000541888 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 DNAJC10Q8IXB1 793 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 CWF19L2Q2TBE0 894 aaKnown RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 NBPF10Q6P3W6 841 aaKnown RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 NBPF15Q8N660 670 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 ARXQ96QS3 562 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 ZBTB40Q9NUA8 1239 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 DDX19BQ9UMR2 479 aa9.75□□□□□ -0.85
AC005840.3-201ENST00000541888 TJP1Q07157 1748 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 BTAF1O14981 1849 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 ARFGEF2Q9Y6D5 1785 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 ATRNO75882 1429 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 SLC10A3P09131 477 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 COPS6Q7L5N1 327 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 ARHGAP45Q92619 1136 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 MAP3K2Q9Y2U5 619 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 AFDNP55196 1824 aaKnown RBP9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 SBF2Q86WG5 1849 aa9.74□□□□□ -0.85
AC005840.3-201ENST00000541888 PTPRCP08575 1304 aa9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 ZNF516Q92618 1163 aa9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 TRPC5Q9UL62 973 aaPredicted RBP9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
AC005840.3-201ENST00000541888 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 TTLL7Q6ZT98 887 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 LRP10Q7Z4F1 713 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 MYH14Q7Z406 1995 aaKnown RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 N4BP2Q86UW6 1770 aaPredicted RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 HOXB7P09629 217 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 RGS3P49796 1198 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 SIRT2Q8IXJ6 389 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms