RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
SMARCA4-207ENST00000541122 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 TTF1Q15361 905 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 KRT86O43790 486 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 NLRP5P59047 1200 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 MYD88Q99836 296 aa17.11■□□□□ 0.33
SMARCA4-207ENST00000541122 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 TRIM21P19474 475 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 DNA2P51530 1060 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 STAMBPO95630 424 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■■■■ 30.1
SMARCA4-207ENST00000541122 FAM76AQ8TAV0 307 aa17.1■□□□□ 0.33
SMARCA4-207ENST00000541122 CCDC40Q4G0X9 1142 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 EIF2AK4Q9P2K8 1649 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 TSHZ3Q63HK5 1081 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 ISM2Q6H9L7 571 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 HOOK3Q86VS8 718 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 TRIM47Q96LD4 638 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 EVCP57679 992 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 KRBA2Q6ZNG9 492 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 SELENOOQ9BVL4 669 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 SPTLC2O15270 562 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 AK2P54819 239 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 RAD50Q92878 1312 aa17.09■□□□□ 0.33
SMARCA4-207ENST00000541122 FSD2A1L4K1 749 aa17.08■□□□□ 0.33
SMARCA4-207ENST00000541122 ZNF76P36508 570 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 UBA7P41226 1012 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC96Q2M329 555 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 RLBP1P12271 317 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 B4GALNT4Q76KP1 1039 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 IGSF3O75054 1194 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 CETN1Q12798 172 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 SPATA24Q86W54 205 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 GTF3C6Q969F1 213 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 IFNKQ9P0W0 207 aa17.08■□□□□ 0.32
SMARCA4-207ENST00000541122 NOP2P46087 812 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 NME9Q86XW9 330 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 RRAGBQ5VZM2 374 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 TTC14Q96N46 770 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 IMPACTQ9P2X3 320 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC172P0C7W6 258 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
SMARCA4-207ENST00000541122 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 KIF5BP33176 963 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 KIF5AQ12840 1032 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 UBE4AQ14139 1066 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 RASAL2Q9UJF2 1139 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 PPM1EQ8WY54 764 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 RSRC1Q96IZ7 334 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 PRPHP41219 470 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 IFIT5Q13325 482 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 CNGA4Q8IV77 575 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
SMARCA4-207ENST00000541122 VAV2P52735 878 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 FBF1Q8TES7 1133 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 A0A1B0GUA9 196 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 Q6ZUG5 572 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 SLC5A1P13866 664 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 CEP85Q6P2H3 762 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
SMARCA4-207ENST00000541122 PSMA7O14818 248 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 ZNF75DP51815 510 aa17.04■□□□□ 0.32
SMARCA4-207ENST00000541122 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms