RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 AIDAQ96BJ3 306 aa19.76■□□□□ 0.75
UBE3B-211ENST00000539843 ISCA1Q9BUE6 129 aa19.76■□□□□ 0.75
UBE3B-211ENST00000539843 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
UBE3B-211ENST00000539843 ITGBL1O95965 494 aaPredicted RBP19.75■□□□□ 0.75
UBE3B-211ENST00000539843 KIAA2012Q0VF49 1180 aa19.75■□□□□ 0.75
UBE3B-211ENST00000539843 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
UBE3B-211ENST00000539843 BCL2L13Q9BXK5 485 aa19.75■□□□□ 0.75
UBE3B-211ENST00000539843 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
UBE3B-211ENST00000539843 ZNF853P0CG23 659 aa19.74■□□□□ 0.75
UBE3B-211ENST00000539843 SCNN1DP51172 638 aa19.74■□□□□ 0.75
UBE3B-211ENST00000539843 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
UBE3B-211ENST00000539843 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
UBE3B-211ENST00000539843 CIAPIN1Q6FI81 312 aa19.74■□□□□ 0.75
UBE3B-211ENST00000539843 TNS4Q8IZW8 715 aa19.74■□□□□ 0.75
UBE3B-211ENST00000539843 ADARB2Q9NS39 739 aaKnown RBP19.74■□□□□ 0.75
UBE3B-211ENST00000539843 ABT1Q9ULW3 272 aaKnown RBP19.74■□□□□ 0.75
UBE3B-211ENST00000539843 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
UBE3B-211ENST00000539843 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
UBE3B-211ENST00000539843 EPS15P42566 896 aa19.73■□□□□ 0.75
UBE3B-211ENST00000539843 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
UBE3B-211ENST00000539843 ELL2O00472 640 aaPredicted RBP19.72■□□□□ 0.75
UBE3B-211ENST00000539843 COL13A1Q5TAT6 717 aaPredicted RBP19.72■□□□□ 0.75
UBE3B-211ENST00000539843 EYA3Q99504 573 aa19.72■□□□□ 0.75
UBE3B-211ENST00000539843 GPRC5DQ9NZD1 345 aa19.72■□□□□ 0.75
UBE3B-211ENST00000539843 NSFL1CQ9UNZ2 370 aaKnown RBP19.72■□□□□ 0.75
UBE3B-211ENST00000539843 COL4A5P29400 1685 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 CXCL9Q07325 125 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 WASHC4Q2M389 1173 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 DEFB115Q30KQ5 88 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
UBE3B-211ENST00000539843 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
UBE3B-211ENST00000539843 ZNF428Q96B54 188 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 STK31Q9BXU1 1019 aa19.71■□□□□ 0.75
UBE3B-211ENST00000539843 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
UBE3B-211ENST00000539843 C6orf229H3BNL8 230 aa19.7■□□□□ 0.74
UBE3B-211ENST00000539843 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
UBE3B-211ENST00000539843 MYD88Q99836 296 aa19.7■□□□□ 0.74
UBE3B-211ENST00000539843 GMPSP49915 693 aaPredicted RBP19.69■□□□□ 0.74
UBE3B-211ENST00000539843 CCDC152Q4G0S7 254 aa19.69■□□□□ 0.74
UBE3B-211ENST00000539843 PAXIP1Q6ZW49 1069 aaPredicted RBP19.69■□□□□ 0.74
UBE3B-211ENST00000539843 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
UBE3B-211ENST00000539843 CWC25Q9NXE8 425 aaPredicted RBP19.69■□□□□ 0.74
UBE3B-211ENST00000539843 LAMB2P55268 1798 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 RASSF10A6NK89 507 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 G3V3G9 751 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 H7C1D1 291 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 RAD17O75943 681 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 VEGFBP49765 207 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 DCAF8Q5TAQ9 597 aa19.68■□□□□ 0.74
UBE3B-211ENST00000539843 CELF1Q92879 486 aaKnown RBP19.68■□□□□ 0.74
UBE3B-211ENST00000539843 PHAXQ9H814 394 aaKnown RBP19.68■□□□□ 0.74
UBE3B-211ENST00000539843 ECE1P42892 770 aa19.67■□□□□ 0.74
UBE3B-211ENST00000539843 RPS8P62241 208 aaKnown RBP19.67■□□□□ 0.74
UBE3B-211ENST00000539843 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
UBE3B-211ENST00000539843 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
UBE3B-211ENST00000539843 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
UBE3B-211ENST00000539843 METTL22Q9BUU2 404 aaPredicted RBP19.66■□□□□ 0.74
UBE3B-211ENST00000539843 ANP32CO43423 234 aa19.65■□□□□ 0.74
UBE3B-211ENST00000539843 PDE8AO60658 829 aa19.65■□□□□ 0.74
UBE3B-211ENST00000539843 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
UBE3B-211ENST00000539843 MAP2K1Q02750 393 aaPredicted RBP19.65■□□□□ 0.74
UBE3B-211ENST00000539843 ZC3H15Q8WU90 426 aaKnown RBP19.65■□□□□ 0.74
UBE3B-211ENST00000539843 BEGAINQ9BUH8 593 aa19.65■□□□□ 0.74
UBE3B-211ENST00000539843 ZC3H12CQ9C0D7 883 aaKnown RBP19.65■□□□□ 0.74
UBE3B-211ENST00000539843 ANKIB1Q9P2G1 1089 aa19.65■□□□□ 0.74
UBE3B-211ENST00000539843 RIMBP2O15034 1052 aa19.64■□□□□ 0.73
UBE3B-211ENST00000539843 WDR33Q9C0J8 1336 aaKnown RBP19.64■□□□□ 0.73
UBE3B-211ENST00000539843 LTBP1Q14766 1721 aa19.64■□□□□ 0.73
UBE3B-211ENST00000539843 DDX60Q8IY21 1712 aaKnown RBP19.64■□□□□ 0.73
UBE3B-211ENST00000539843 RPS12P25398 132 aaKnown RBP19.63■□□□□ 0.73
UBE3B-211ENST00000539843 GPSM2P81274 684 aa19.63■□□□□ 0.73
UBE3B-211ENST00000539843 DBNDD1Q9H9R9 158 aa19.63■□□□□ 0.73
UBE3B-211ENST00000539843 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
UBE3B-211ENST00000539843 CNOT7Q9UIV1 285 aaKnown RBP19.63■□□□□ 0.73
UBE3B-211ENST00000539843 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
UBE3B-211ENST00000539843 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 ECE2O60344 883 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 TWISTNBQ3B726 338 aaPredicted RBP19.62■□□□□ 0.73
UBE3B-211ENST00000539843 KSR2Q6VAB6 950 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 ANKRD18AQ8IVF6 992 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 MICALL2Q8IY33 904 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 DPF2Q92785 391 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
UBE3B-211ENST00000539843 GGA1Q9UJY5 639 aa19.62■□□□□ 0.73
UBE3B-211ENST00000539843 IL16Q14005 1332 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 FOXN1O15353 648 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 CAPN15O75808 1086 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 UFL1O94874 794 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 GRM1Q13255 1194 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
UBE3B-211ENST00000539843 CDC37L1Q7L3B6 337 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 TBC1D16Q8TBP0 767 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 TSR2Q969E8 191 aaKnown RBP19.61■□□□□ 0.73
UBE3B-211ENST00000539843 PRDM10Q9NQV6 1147 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 DUOX1Q9NRD9 1551 aa19.61■□□□□ 0.73
UBE3B-211ENST00000539843 YDJCA8MPS7 323 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 TRAF5O00463 557 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 PSMD14O00487 310 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 CELF2O95319 508 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms