RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
CDK2AP1-204ENST00000538446 CHMP3Q9Y3E7 222 aa15.97■□□□□ 0.15
CDK2AP1-204ENST00000538446 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
CDK2AP1-204ENST00000538446 N4BP2Q86UW6 1770 aaPredicted RBP15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 ALDH1B1P30837 517 aa15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 LMBR1LQ6UX01 489 aa15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 CCDC85AQ96PX6 553 aaPredicted RBP15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 PIM2Q9P1W9 311 aa15.96■□□□□ 0.15
CDK2AP1-204ENST00000538446 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 CSF1RP07333 972 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 KCNA3P22001 575 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 TTLL6Q8N841 843 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 ANKRD44Q8N8A2 993 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 CRAMP1Q96RY5 1269 aa15.95■□□□□ 0.14
CDK2AP1-204ENST00000538446 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
CDK2AP1-204ENST00000538446 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
CDK2AP1-204ENST00000538446 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
CDK2AP1-204ENST00000538446 GREM2Q9H772 168 aa15.94■□□□□ 0.14
CDK2AP1-204ENST00000538446 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
CDK2AP1-204ENST00000538446 ITGA6P23229 1130 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 GRAPQ13588 217 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 CCDC57Q2TAC2 916 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 DALRD3Q5D0E6 543 aaKnown RBP15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 KIF13BQ9NQT8 1826 aa15.93■□□□□ 0.14
CDK2AP1-204ENST00000538446 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 PRPF40BQ6NWY9 871 aaKnown RBP15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 LAMB2P55268 1798 aa15.92■□□□□ 0.14
CDK2AP1-204ENST00000538446 BBOX1O75936 387 aa15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 MTX1Q13505 466 aa15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 TAF7LQ5H9L4 462 aa15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 ANKRD18AQ8IVF6 992 aa15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 CELF1Q92879 486 aaKnown RBP15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 BCS1LQ9Y276 419 aa15.91■□□□□ 0.14
CDK2AP1-204ENST00000538446 PPEF1O14829 653 aaPredicted RBP15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 IRX6P78412 446 aaPredicted RBP15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
CDK2AP1-204ENST00000538446 COL11A2P13942 1736 aaPredicted RBP15.89■□□□□ 0.13
CDK2AP1-204ENST00000538446 SRGAP3O43295 1099 aa15.89■□□□□ 0.13
CDK2AP1-204ENST00000538446 AAMPQ13685 434 aa15.89■□□□□ 0.13
CDK2AP1-204ENST00000538446 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
CDK2AP1-204ENST00000538446 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
CDK2AP1-204ENST00000538446 NEFLP07196 543 aa15.88■□□□□ 0.13
CDK2AP1-204ENST00000538446 CEP85Q6P2H3 762 aa15.88■□□□□ 0.13
CDK2AP1-204ENST00000538446 RPAP2Q8IXW5 612 aaPredicted RBP15.88■□□□□ 0.13
CDK2AP1-204ENST00000538446 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CDK2AP1-204ENST00000538446 C21orf2O43822 256 aa15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 BSDC1Q9NW68 430 aaPredicted RBP15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
CDK2AP1-204ENST00000538446 PNMA6EA0A0J9YXQ4 647 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 HMMRO75330 724 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 GPR162Q16538 588 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 CC2D2BQ6DHV5 1058 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 LDHAL6AQ6ZMR3 332 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 ZNF594Q96JF6 807 aaPredicted RBP15.86■□□□□ 0.13
CDK2AP1-204ENST00000538446 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 CNNM1Q9NRU3 951 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
CDK2AP1-204ENST00000538446 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDK2AP1-204ENST00000538446 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
CDK2AP1-204ENST00000538446 POLA2Q14181 598 aa15.84■□□□□ 0.13
CDK2AP1-204ENST00000538446 GRIPAP1Q4V328 841 aa15.84■□□□□ 0.13
CDK2AP1-204ENST00000538446 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
CDK2AP1-204ENST00000538446 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 RTKN2Q8IZC4 609 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 SIL1Q9H173 461 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 COPRSQ9NQ92 184 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 PA2G4Q9UQ80 394 aaKnown RBP15.83■□□□□ 0.12
CDK2AP1-204ENST00000538446 SRCAPQ6ZRS2 3230 aa15.82■□□□□ 0.12
CDK2AP1-204ENST00000538446 EYA2O00167 538 aa15.82■□□□□ 0.12
CDK2AP1-204ENST00000538446 GRIN3BO60391 1043 aa15.82■□□□□ 0.12
CDK2AP1-204ENST00000538446 CIAO1O76071 339 aa15.82■□□□□ 0.12
CDK2AP1-204ENST00000538446 MPNDQ8N594 471 aa15.82■□□□□ 0.12
CDK2AP1-204ENST00000538446 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms