RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-217ENST00000534699 PSME4Q14997 1843 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 ANXA1P04083 346 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-217ENST00000534699 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-217ENST00000534699 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 ZNF428Q96B54 188 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
CSDE1-217ENST00000534699 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
CSDE1-217ENST00000534699 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
CSDE1-217ENST00000534699 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
CSDE1-217ENST00000534699 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
CSDE1-217ENST00000534699 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
CSDE1-217ENST00000534699 SRCAPQ6ZRS2 3230 aa13.33□□□□□ -0.28
CSDE1-217ENST00000534699 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
CSDE1-217ENST00000534699 DDNO94850 711 aaPredicted RBP13.32□□□□□ -0.28
CSDE1-217ENST00000534699 TRPM7Q96QT4 1865 aa13.32□□□□□ -0.28
CSDE1-217ENST00000534699 RPS12P25398 132 aaKnown RBP13.31□□□□□ -0.28
CSDE1-217ENST00000534699 EPHX2P34913 555 aa13.31□□□□□ -0.28
CSDE1-217ENST00000534699 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
CSDE1-217ENST00000534699 PPIP5K2O43314 1243 aa13.31□□□□□ -0.28
CSDE1-217ENST00000534699 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
CSDE1-217ENST00000534699 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
CSDE1-217ENST00000534699 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
CSDE1-217ENST00000534699 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
CSDE1-217ENST00000534699 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
CSDE1-217ENST00000534699 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
CSDE1-217ENST00000534699 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
CSDE1-217ENST00000534699 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
CSDE1-217ENST00000534699 DPF2Q92785 391 aa13.3□□□□□ -0.28
CSDE1-217ENST00000534699 MYD88Q99836 296 aa13.3□□□□□ -0.28
CSDE1-217ENST00000534699 PGAP2Q9UHJ9 254 aa13.29□□□□□ -0.28
CSDE1-217ENST00000534699 H7C1W4 665 aa13.29□□□□□ -0.28
CSDE1-217ENST00000534699 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
CSDE1-217ENST00000534699 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
CSDE1-217ENST00000534699 CIAPIN1Q6FI81 312 aa13.29□□□□□ -0.28
CSDE1-217ENST00000534699 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
CSDE1-217ENST00000534699 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
CSDE1-217ENST00000534699 VAMP4O75379 141 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
CSDE1-217ENST00000534699 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 FAM89AQ96GI7 184 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 COL4A5P29400 1685 aa13.28□□□□□ -0.28
CSDE1-217ENST00000534699 ZNF521Q96K83 1311 aa13.27□□□□□ -0.28
CSDE1-217ENST00000534699 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
CSDE1-217ENST00000534699 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
CSDE1-217ENST00000534699 THSD7BQ9C0I4 1608 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 CTSWP56202 376 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 FLIIQ13045 1269 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 ANKRD18AQ8IVF6 992 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 ITGBL1O95965 494 aaPredicted RBP13.26□□□□□ -0.29
CSDE1-217ENST00000534699 WASHC4Q2M389 1173 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 HHIPL1Q96JK4 782 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
CSDE1-217ENST00000534699 XDHP47989 1333 aa13.26□□□□□ -0.29
CSDE1-217ENST00000534699 TAF1P21675 1872 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 TMEM88BA6NKF7 163 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 AOC3Q16853 763 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
CSDE1-217ENST00000534699 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 E9PSI1 815 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 IGKV5-2P06315 115 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 SCNN1DP51172 638 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 CXCL9Q07325 125 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
CSDE1-217ENST00000534699 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
CSDE1-217ENST00000534699 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
CSDE1-217ENST00000534699 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
CSDE1-217ENST00000534699 CSF1RP07333 972 aa13.24□□□□□ -0.29
CSDE1-217ENST00000534699 GCKRQ14397 625 aa13.24□□□□□ -0.29
CSDE1-217ENST00000534699 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
CSDE1-217ENST00000534699 TBC1D16Q8TBP0 767 aa13.24□□□□□ -0.29
CSDE1-217ENST00000534699 ZC3H12CQ9C0D7 883 aaKnown RBP13.24□□□□□ -0.29
CSDE1-217ENST00000534699 H7C1D1 291 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 GPSM2P81274 684 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 C15orf52Q6ZUT6 534 aaKnown RBP13.23□□□□□ -0.29
CSDE1-217ENST00000534699 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 TTLL11Q8NHH1 800 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 PTPRCP08575 1304 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
CSDE1-217ENST00000534699 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 GJA3Q9Y6H8 435 aa13.23□□□□□ -0.29
CSDE1-217ENST00000534699 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
CSDE1-217ENST00000534699 CASP7P55210 303 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms