RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 SP8Q8IXZ3 490 aa15.14■□□□□ 0.01
CTNND1-238ENST00000534647 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
CTNND1-238ENST00000534647 SUPT20HQ8NEM7 779 aa15.14■□□□□ 0.01
CTNND1-238ENST00000534647 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
CTNND1-238ENST00000534647 TMPOP42166 694 aaKnown RBP15.13■□□□□ 0.01
CTNND1-238ENST00000534647 MAP2K1Q02750 393 aaPredicted RBP15.13■□□□□ 0.01
CTNND1-238ENST00000534647 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
CTNND1-238ENST00000534647 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
CTNND1-238ENST00000534647 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
CTNND1-238ENST00000534647 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
CTNND1-238ENST00000534647 COPS6Q7L5N1 327 aa15.12■□□□□ 0.01
CTNND1-238ENST00000534647 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
CTNND1-238ENST00000534647 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CTNND1-238ENST00000534647 WDR33Q9C0J8 1336 aaKnown RBP15.12■□□□□ 0.01
CTNND1-238ENST00000534647 CHL1O00533 1208 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 CXCL9Q07325 125 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 TCIRG1Q13488 830 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 AOC3Q16853 763 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 ADARB2Q9NS39 739 aaKnown RBP15.11■□□□□ 0.01
CTNND1-238ENST00000534647 GPRC5DQ9NZD1 345 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 PGAP2Q9UHJ9 254 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 LTBP1Q14766 1721 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 ABCC4O15439 1325 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 CDHR2Q9BYE9 1310 aa15.11■□□□□ 0.01
CTNND1-238ENST00000534647 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
CTNND1-238ENST00000534647 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
CTNND1-238ENST00000534647 CST9Q5W186 159 aa15.1■□□□□ 0.01
CTNND1-238ENST00000534647 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
CTNND1-238ENST00000534647 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
CTNND1-238ENST00000534647 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
CTNND1-238ENST00000534647 ABT1Q9ULW3 272 aaKnown RBP15.1■□□□□ 0.01
CTNND1-238ENST00000534647 ANXA1P04083 346 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 ECE1P42892 770 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 LBX1P52954 281 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
CTNND1-238ENST00000534647 MPNDQ8N594 471 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 XAGE3Q8WTP9 111 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 ZC3H15Q8WU90 426 aaKnown RBP15.09■□□□□ 0.01
CTNND1-238ENST00000534647 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
CTNND1-238ENST00000534647 HOXB7P09629 217 aa15.08■□□□□ 0
CTNND1-238ENST00000534647 HSPA8P11142 646 aaKnown RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 GRAPQ13588 217 aa15.08■□□□□ 0
CTNND1-238ENST00000534647 TNIP1Q15025 636 aa15.08■□□□□ 0
CTNND1-238ENST00000534647 DDX46Q7L014 1031 aaKnown RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 CIZ1Q9ULV3 898 aaPredicted RBP15.08■□□□□ 0
CTNND1-238ENST00000534647 TLL2Q9Y6L7 1015 aa15.08■□□□□ 0
CTNND1-238ENST00000534647 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
CTNND1-238ENST00000534647 CIAPIN1Q6FI81 312 aa15.07■□□□□ 0
CTNND1-238ENST00000534647 PLBD2Q8NHP8 589 aa15.07■□□□□ 0
CTNND1-238ENST00000534647 HHIPL1Q96JK4 782 aa15.07■□□□□ 0
CTNND1-238ENST00000534647 CAPNS2Q96L46 248 aa15.07■□□□□ 0
CTNND1-238ENST00000534647 MAP2K2P36507 400 aa15.06■□□□□ 0
CTNND1-238ENST00000534647 GMPSP49915 693 aaPredicted RBP15.06■□□□□ 0
CTNND1-238ENST00000534647 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 02e-6■■■■□ 22.2
CTNND1-238ENST00000534647 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
CTNND1-238ENST00000534647 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
CTNND1-238ENST00000534647 TRAF5O00463 557 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 TRIM28Q13263 835 aaKnown RBP15.05■□□□□ -0
CTNND1-238ENST00000534647 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ -0
CTNND1-238ENST00000534647 ANKRD13DQ6ZTN6 518 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 NECTIN2Q92692 538 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 RUNDC1Q96C34 613 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 ISCA1Q9BUE6 129 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ -0
CTNND1-238ENST00000534647 ANKRD36CQ5JPF3 1778 aa15.05■□□□□ -0
CTNND1-238ENST00000534647 THSD7BQ9C0I4 1608 aa15.04■□□□□ -0
CTNND1-238ENST00000534647 MYBBP1AQ9BQG0 1328 aaKnown RBP15.04■□□□□ -0
CTNND1-238ENST00000534647 SAPCD2Q86UD0 394 aa15.04■□□□□ -0
CTNND1-238ENST00000534647 DPF2Q92785 391 aa15.04■□□□□ -0
CTNND1-238ENST00000534647 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
CTNND1-238ENST00000534647 HIRAP54198 1017 aaPredicted RBP15.03■□□□□ -0
CTNND1-238ENST00000534647 KRT24Q2M2I5 525 aa15.03■□□□□ -0
CTNND1-238ENST00000534647 CYP4F22Q6NT55 531 aa15.03■□□□□ -0
CTNND1-238ENST00000534647 CDC37L1Q7L3B6 337 aa15.03■□□□□ -0
CTNND1-238ENST00000534647 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
CTNND1-238ENST00000534647 HYPKQ9NX55 129 aa15.03■□□□□ -0
CTNND1-238ENST00000534647 YDJCA8MPS7 323 aa15.02■□□□□ -0
CTNND1-238ENST00000534647 RAD17O75943 681 aa15.02■□□□□ -0
CTNND1-238ENST00000534647 NEUROD2Q15784 382 aa15.02■□□□□ -0
CTNND1-238ENST00000534647 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
CTNND1-238ENST00000534647 BCL2L13Q9BXK5 485 aa15.02■□□□□ -0
CTNND1-238ENST00000534647 CNOT7Q9UIV1 285 aaKnown RBP15.02■□□□□ -0
CTNND1-238ENST00000534647 H7C1D1 291 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 CA12O43570 354 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 CELF2O95319 508 aaKnown RBP15.01□□□□□ -0.01
CTNND1-238ENST00000534647 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 FAM89AQ96GI7 184 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 ABHD8Q96I13 439 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 GLIS2Q9BZE0 524 aaPredicted RBP15.01□□□□□ -0.01
CTNND1-238ENST00000534647 LAMB2P55268 1798 aa15.01□□□□□ -0.01
CTNND1-238ENST00000534647 TRPM7Q96QT4 1865 aa15□□□□□ -0.01
CTNND1-238ENST00000534647 DUOX1Q9NRD9 1551 aa15□□□□□ -0.01
CTNND1-238ENST00000534647 POLA2Q14181 598 aa15□□□□□ -0.01
CTNND1-238ENST00000534647 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
CTNND1-238ENST00000534647 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
CTNND1-238ENST00000534647 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms