RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 GNAQP50148 359 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
AMBRA1-211ENST00000533727 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 SYCP1Q15431 976 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 SH2D4AQ9H788 454 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
AMBRA1-211ENST00000533727 CFAP65Q6ZU64 1925 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 BAG4O95429 457 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 PHKG2P15735 406 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 PDE4CQ08493 712 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 ARHGEF25Q86VW2 580 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 ESR2Q92731 530 aa13.12□□□□□ -0.31
AMBRA1-211ENST00000533727 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 H0YHG0 523 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 VAMP4O75379 141 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 RUFY1Q96T51 708 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 ME1P48163 572 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 TTC6Q86TZ1 520 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-211ENST00000533727 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 USP6P35125 1406 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 SSRP1Q08945 709 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 ZHX3Q9H4I2 956 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 CDR1P51861 262 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 UFL1O94874 794 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
AMBRA1-211ENST00000533727 CHL1O00533 1208 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 KIF20AO95235 890 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 SMARCE1Q969G3 411 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 MEIS3Q99687 375 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 UQCRHLA0A096LP55 91 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 UQCRHP07919 91 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 DESP17661 470 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 CEP57L1Q8IYX8 460 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 BMP2KLQ5H9B9 411 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 WDR66Q8TBY9 1149 aa13.09□□□□□ -0.31
AMBRA1-211ENST00000533727 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.31
AMBRA1-211ENST00000533727 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 JARID2Q92833 1246 aaPredicted RBP13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 JCADQ9P266 1359 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 SMC2O95347 1197 aa13.08□□□□□ -0.32
AMBRA1-211ENST00000533727 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 MCM5P33992 734 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 NLRP5P59047 1200 aa13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-211ENST00000533727 EYA2O00167 538 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms