RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ABCC4O15439 1325 aa17.15■□□□□ 0.34
COPB1-209ENST00000533096 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
COPB1-209ENST00000533096 H7C1D1 291 aa17.14■□□□□ 0.33
COPB1-209ENST00000533096 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
COPB1-209ENST00000533096 RIPK4P57078 832 aa17.14■□□□□ 0.33
COPB1-209ENST00000533096 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
COPB1-209ENST00000533096 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
COPB1-209ENST00000533096 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
COPB1-209ENST00000533096 BCORQ6W2J9 1755 aa17.13■□□□□ 0.33
COPB1-209ENST00000533096 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
COPB1-209ENST00000533096 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
COPB1-209ENST00000533096 ZIC5Q96T25 663 aa17.13■□□□□ 0.33
COPB1-209ENST00000533096 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
COPB1-209ENST00000533096 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
COPB1-209ENST00000533096 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
COPB1-209ENST00000533096 DGKZQ13574 1117 aa17.12■□□□□ 0.33
COPB1-209ENST00000533096 SAMD7Q7Z3H4 446 aa17.12■□□□□ 0.33
COPB1-209ENST00000533096 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
COPB1-209ENST00000533096 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
COPB1-209ENST00000533096 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
COPB1-209ENST00000533096 TCIRG1Q13488 830 aa17.11■□□□□ 0.33
COPB1-209ENST00000533096 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
COPB1-209ENST00000533096 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
COPB1-209ENST00000533096 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
COPB1-209ENST00000533096 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 HUNKP57058 714 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 GRAPQ13588 217 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
COPB1-209ENST00000533096 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
COPB1-209ENST00000533096 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
COPB1-209ENST00000533096 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
COPB1-209ENST00000533096 ADAMTSL1Q8N6G6 1762 aa17.1■□□□□ 0.33
COPB1-209ENST00000533096 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 CA12O43570 354 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
COPB1-209ENST00000533096 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
COPB1-209ENST00000533096 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
COPB1-209ENST00000533096 RIC1Q4ADV7 1423 aa17.08■□□□□ 0.32
COPB1-209ENST00000533096 RGS19P49795 217 aa17.08■□□□□ 0.32
COPB1-209ENST00000533096 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
COPB1-209ENST00000533096 KCNQ5Q9NR82 932 aa17.08■□□□□ 0.32
COPB1-209ENST00000533096 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 PSMD14O00487 310 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 SLC34A2O95436 690 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 HHIPL1Q96JK4 782 aa17.07■□□□□ 0.32
COPB1-209ENST00000533096 NOGQ13253 232 aa17.06■□□□□ 0.32
COPB1-209ENST00000533096 C2orf69Q8N8R5 385 aa17.06■□□□□ 0.32
COPB1-209ENST00000533096 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
COPB1-209ENST00000533096 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
COPB1-209ENST00000533096 G3V3G9 751 aa17.05■□□□□ 0.32
COPB1-209ENST00000533096 EGFRP00533 1210 aa17.05■□□□□ 0.32
COPB1-209ENST00000533096 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
COPB1-209ENST00000533096 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
COPB1-209ENST00000533096 CELF1Q92879 486 aaKnown RBP17.05■□□□□ 0.32
COPB1-209ENST00000533096 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
COPB1-209ENST00000533096 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
COPB1-209ENST00000533096 GPSM2P81274 684 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 RGMBQ6NW40 437 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 DPF2Q92785 391 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
COPB1-209ENST00000533096 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
COPB1-209ENST00000533096 TRPA1O75762 1119 aa17.03■□□□□ 0.32
COPB1-209ENST00000533096 TMC4Q7Z404 712 aa17.03■□□□□ 0.32
COPB1-209ENST00000533096 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
COPB1-209ENST00000533096 ECE2O60344 883 aa17.02■□□□□ 0.32
COPB1-209ENST00000533096 ZC3H12CQ9C0D7 883 aaKnown RBP17.02■□□□□ 0.32
COPB1-209ENST00000533096 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
COPB1-209ENST00000533096 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
COPB1-209ENST00000533096 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
COPB1-209ENST00000533096 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
COPB1-209ENST00000533096 FAM155AB1AL88 458 aaPredicted RBP17■□□□□ 0.31
COPB1-209ENST00000533096 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
COPB1-209ENST00000533096 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
COPB1-209ENST00000533096 SULF1Q8IWU6 871 aa17■□□□□ 0.31
COPB1-209ENST00000533096 EYA3Q99504 573 aa17■□□□□ 0.31
COPB1-209ENST00000533096 RNF186Q9NXI6 227 aa17■□□□□ 0.31
COPB1-209ENST00000533096 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
COPB1-209ENST00000533096 CHL1O00533 1208 aa16.99■□□□□ 0.31
COPB1-209ENST00000533096 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
COPB1-209ENST00000533096 SOX10P56693 466 aa16.99■□□□□ 0.31
COPB1-209ENST00000533096 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
COPB1-209ENST00000533096 TBC1D16Q8TBP0 767 aa16.99■□□□□ 0.31
COPB1-209ENST00000533096 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
COPB1-209ENST00000533096 ANKIB1Q9P2G1 1089 aa16.99■□□□□ 0.31
COPB1-209ENST00000533096 RPS12P25398 132 aaKnown RBP16.98■□□□□ 0.31
COPB1-209ENST00000533096 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
COPB1-209ENST00000533096 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms