RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 C8orf37Q96NL8 207 aa16.14■□□□□ 0.17
CAPRIN1-212ENST00000532820 ITGB4P16144 1822 aa16.14■□□□□ 0.17
CAPRIN1-212ENST00000532820 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
CAPRIN1-212ENST00000532820 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
CAPRIN1-212ENST00000532820 FAM98CQ17RN3 349 aaKnown RBP16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 DZIP3Q86Y13 1208 aaKnown RBP16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 TRMT112Q9UI30 125 aaKnown RBP16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 NUCB2P80303 420 aa16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 CWC22Q9HCG8 908 aaKnown RBP16.13■□□□□ 0.17
CAPRIN1-212ENST00000532820 MCM2P49736 904 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 ADORA1P30542 326 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 RUFY3Q7L099 469 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 GREM2Q9H772 168 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 NUP188Q5SRE5 1749 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 COL15A1P39059 1388 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 LARGE1O95461 756 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 NECTIN1Q15223 517 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 CEP126Q9P2H0 1117 aa16.12■□□□□ 0.17
CAPRIN1-212ENST00000532820 TOM1O60784 492 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 AHDC1Q5TGY3 1603 aaPredicted RBP16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 LTBP4Q8N2S1 1624 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 HIP1O00291 1037 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 MAP4K1Q92918 833 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 HAUS7Q99871 368 aa16.11■□□□□ 0.17
CAPRIN1-212ENST00000532820 CYP2E1P05181 493 aaPredicted RBP16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 TTC14Q96N46 770 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 TJP1Q07157 1748 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 SLC27A2O14975 620 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 ITGA6P23229 1130 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 CUL4AQ13619 759 aa16.1■□□□□ 0.17
CAPRIN1-212ENST00000532820 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 SIK1P57059 783 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 ITPK1Q13572 414 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 PI16Q6UXB8 463 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 PTF1AQ7RTS3 328 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 IL27Q8NEV9 243 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 CYP46A1Q9Y6A2 500 aa16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-212ENST00000532820 TAF5LO75529 589 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 CCDC83Q8IWF9 413 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 HELBQ8NG08 1087 aaPredicted RBP16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.16
CAPRIN1-212ENST00000532820 ZNF609O15014 1411 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 SCARF1Q14162 830 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
CAPRIN1-212ENST00000532820 SNAP23O00161 211 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 MED23Q9ULK4 1368 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 ZSWIM6Q9HCJ5 1215 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 CSF1RP07333 972 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 CTSWP56202 376 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 CDCA7Q9BWT1 371 aaPredicted RBP16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
CAPRIN1-212ENST00000532820 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
CAPRIN1-212ENST00000532820 GOLGA6L3A6NEY3 463 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms