RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 UBE3BQ7Z3V4 1068 aa17.73■□□□□ 0.43
TSPAN4-220ENST00000532375 ZNF784Q8NCA9 323 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-220ENST00000532375 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-220ENST00000532375 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 ALDH1L1O75891 902 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 LMNB1P20700 586 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 GRAPQ13588 217 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 DDX46Q7L014 1031 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 TTLL11Q8NHH1 800 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
TSPAN4-220ENST00000532375 SLC4A10Q6U841 1118 aa17.71■□□□□ 0.43
TSPAN4-220ENST00000532375 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
TSPAN4-220ENST00000532375 SRCIN1Q9C0H9 1055 aa17.71■□□□□ 0.43
TSPAN4-220ENST00000532375 BCAR3O75815 825 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 CSF1RP07333 972 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 CTSWP56202 376 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 UTYO14607 1347 aa17.7■□□□□ 0.42
TSPAN4-220ENST00000532375 LRRC37AA6NMS7 1700 aa17.69■□□□□ 0.42
TSPAN4-220ENST00000532375 GRM8O00222 908 aa17.69■□□□□ 0.42
TSPAN4-220ENST00000532375 FOXO4P98177 505 aa17.69■□□□□ 0.42
TSPAN4-220ENST00000532375 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.422e-6■■■■■ 27.9
TSPAN4-220ENST00000532375 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
TSPAN4-220ENST00000532375 PSMD1Q99460 953 aa17.69■□□□□ 0.42
TSPAN4-220ENST00000532375 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 GREM2Q9H772 168 aa17.68■□□□□ 0.42
TSPAN4-220ENST00000532375 NBPF7P0C2Y1 421 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-220ENST00000532375 GRIPAP1Q4V328 841 aa17.67■□□□□ 0.42
TSPAN4-220ENST00000532375 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-220ENST00000532375 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
TSPAN4-220ENST00000532375 LTBP1Q14766 1721 aa17.67■□□□□ 0.42
TSPAN4-220ENST00000532375 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
TSPAN4-220ENST00000532375 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-220ENST00000532375 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
TSPAN4-220ENST00000532375 COL4A5P29400 1685 aa17.66■□□□□ 0.42
TSPAN4-220ENST00000532375 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
TSPAN4-220ENST00000532375 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-220ENST00000532375 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-220ENST00000532375 TIAM2Q8IVF5 1701 aa17.64■□□□□ 0.41
TSPAN4-220ENST00000532375 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
TSPAN4-220ENST00000532375 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-220ENST00000532375 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
TSPAN4-220ENST00000532375 TRIM27P14373 513 aa17.63■□□□□ 0.41
TSPAN4-220ENST00000532375 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-220ENST00000532375 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
TSPAN4-220ENST00000532375 GPSM2P81274 684 aa17.62■□□□□ 0.41
TSPAN4-220ENST00000532375 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-220ENST00000532375 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
TSPAN4-220ENST00000532375 MPNDQ8N594 471 aa17.62■□□□□ 0.41
TSPAN4-220ENST00000532375 ITGA6P23229 1130 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 CCT4P50991 539 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 POLLQ9UGP5 575 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
TSPAN4-220ENST00000532375 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 FZD9O00144 591 aa17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 ZNF526Q8TF50 670 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 BSDC1Q9NW68 430 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 NSFL1CQ9UNZ2 370 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-220ENST00000532375 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-220ENST00000532375 POTECB2RU33 542 aa17.59■□□□□ 0.41
TSPAN4-220ENST00000532375 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-220ENST00000532375 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-220ENST00000532375 MINPP1Q9UNW1 487 aa17.59■□□□□ 0.41
TSPAN4-220ENST00000532375 KIF3CO14782 793 aa17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 KIAA2012Q0VF49 1180 aa17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 TBC1D16Q8TBP0 767 aa17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 GPBP1L1Q9HC44 474 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
TSPAN4-220ENST00000532375 AOC3Q16853 763 aa17.57■□□□□ 0.4
TSPAN4-220ENST00000532375 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
TSPAN4-220ENST00000532375 SUPT20HQ8NEM7 779 aa17.57■□□□□ 0.4
TSPAN4-220ENST00000532375 ZNF541Q9H0D2 1346 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 PPIP5K2O43314 1243 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms