RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
AMBRA1-210ENST00000531542 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
AMBRA1-210ENST00000531542 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
AMBRA1-210ENST00000531542 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
AMBRA1-210ENST00000531542 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 EPS15P42566 896 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 CXCL9Q07325 125 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 COL13A1Q5TAT6 717 aaPredicted RBP17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 FAM89AQ96GI7 184 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 GPRC5DQ9NZD1 345 aa17.25■□□□□ 0.35
AMBRA1-210ENST00000531542 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
AMBRA1-210ENST00000531542 MAP1SQ66K74 1059 aaPredicted RBP17.24■□□□□ 0.35
AMBRA1-210ENST00000531542 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
AMBRA1-210ENST00000531542 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
AMBRA1-210ENST00000531542 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
AMBRA1-210ENST00000531542 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 TNIP1Q15025 636 aa17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 ADARB2Q9NS39 739 aaKnown RBP17.23■□□□□ 0.35
AMBRA1-210ENST00000531542 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
AMBRA1-210ENST00000531542 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
AMBRA1-210ENST00000531542 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
AMBRA1-210ENST00000531542 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
AMBRA1-210ENST00000531542 LAMB2P55268 1798 aa17.22■□□□□ 0.35
AMBRA1-210ENST00000531542 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
AMBRA1-210ENST00000531542 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.35
AMBRA1-210ENST00000531542 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
AMBRA1-210ENST00000531542 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 VEGFBP49765 207 aa17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 ZC3H15Q8WU90 426 aaKnown RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 LRRC37AA6NMS7 1700 aa17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 IL16Q14005 1332 aa17.2■□□□□ 0.34
AMBRA1-210ENST00000531542 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
AMBRA1-210ENST00000531542 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
AMBRA1-210ENST00000531542 YDJCA8MPS7 323 aa17.18■□□□□ 0.34
AMBRA1-210ENST00000531542 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
AMBRA1-210ENST00000531542 DPF2Q92785 391 aa17.18■□□□□ 0.34
AMBRA1-210ENST00000531542 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
AMBRA1-210ENST00000531542 PDE8AO60658 829 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 GPSM2P81274 684 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 TSPYL6Q8N831 410 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 EYA3Q99504 573 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 MYD88Q99836 296 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 POLLQ9UGP5 575 aa17.17■□□□□ 0.34
AMBRA1-210ENST00000531542 RAD17O75943 681 aa17.16■□□□□ 0.34
AMBRA1-210ENST00000531542 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
AMBRA1-210ENST00000531542 CST9Q5W186 159 aa17.16■□□□□ 0.34
AMBRA1-210ENST00000531542 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
AMBRA1-210ENST00000531542 WBP1LQ9NX94 342 aa17.16■□□□□ 0.34
AMBRA1-210ENST00000531542 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
AMBRA1-210ENST00000531542 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 H7C1D1 291 aa17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 HHIPL1Q96JK4 782 aa17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 ABT1Q9ULW3 272 aaKnown RBP17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
AMBRA1-210ENST00000531542 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 FOXN1O15353 648 aa17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 ECE1P42892 770 aa17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 CTCFP49711 727 aaPredicted RBP17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 MAP2K1Q02750 393 aaPredicted RBP17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
AMBRA1-210ENST00000531542 TRAF5O00463 557 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 PSMD14O00487 310 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 NEXNQ0ZGT2 675 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 WDR63Q8IWG1 891 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
AMBRA1-210ENST00000531542 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms