RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 USP47Q96K76 1375 aa11.13□□□□□ -0.63
POLB-216ENST00000530566 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
POLB-216ENST00000530566 SMPD1P17405 629 aa11.12□□□□□ -0.63
POLB-216ENST00000530566 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
POLB-216ENST00000530566 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
POLB-216ENST00000530566 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
POLB-216ENST00000530566 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
POLB-216ENST00000530566 GLTPD2A6NH11 291 aa11.11□□□□□ -0.63
POLB-216ENST00000530566 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
POLB-216ENST00000530566 DPEP1P16444 411 aa11.11□□□□□ -0.63
POLB-216ENST00000530566 AK7Q96M32 723 aa11.11□□□□□ -0.63
POLB-216ENST00000530566 ZC3H4Q9UPT8 1303 aaKnown RBP11.1□□□□□ -0.63
POLB-216ENST00000530566 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
POLB-216ENST00000530566 GJA5P36382 358 aa11.1□□□□□ -0.63
POLB-216ENST00000530566 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
POLB-216ENST00000530566 BEGAINQ9BUH8 593 aa11.1□□□□□ -0.63
POLB-216ENST00000530566 C5P01031 1676 aa11.1□□□□□ -0.63
POLB-216ENST00000530566 NSD2O96028 1365 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 J3QL48 77 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 MMP10P09238 476 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 NDUFV2P19404 249 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 SKOR1P84550 965 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 MTMR2Q13614 643 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 PTPRNQ16849 979 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
POLB-216ENST00000530566 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 MCOLN1Q9GZU1 580 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 DACH1Q9UI36 760 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
POLB-216ENST00000530566 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
POLB-216ENST00000530566 DALRD3Q5D0E6 543 aaKnown RBP11.07□□□□□ -0.64
POLB-216ENST00000530566 DESI1Q6ICB0 168 aa11.07□□□□□ -0.64
POLB-216ENST00000530566 EHBP1Q8NDI1 1231 aa11.07□□□□□ -0.64
POLB-216ENST00000530566 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
POLB-216ENST00000530566 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
POLB-216ENST00000530566 KIF13BQ9NQT8 1826 aa11.07□□□□□ -0.64
POLB-216ENST00000530566 TMEM88BA6NKF7 163 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 DLL1O00548 723 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 PTCRAQ6ISU1 281 aaPredicted RBP11.06□□□□□ -0.64
POLB-216ENST00000530566 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 VIRMAQ69YN4 1812 aaKnown RBP11.06□□□□□ -0.64
POLB-216ENST00000530566 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
POLB-216ENST00000530566 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 TRIM66O15016 1216 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 ALDH1A1P00352 501 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 EVA1BQ9NVM1 165 aa11.05□□□□□ -0.64
POLB-216ENST00000530566 KCNA3P22001 575 aa11.04□□□□□ -0.64
POLB-216ENST00000530566 SSFA2P28290 1259 aa11.04□□□□□ -0.64
POLB-216ENST00000530566 DEFB115Q30KQ5 88 aa11.04□□□□□ -0.64
POLB-216ENST00000530566 C4BP0C0L5 1744 aa11.04□□□□□ -0.64
POLB-216ENST00000530566 LMNB1P20700 586 aa11.03□□□□□ -0.64
POLB-216ENST00000530566 SOX10P56693 466 aa11.03□□□□□ -0.64
POLB-216ENST00000530566 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
POLB-216ENST00000530566 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
POLB-216ENST00000530566 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
POLB-216ENST00000530566 WDR33Q9C0J8 1336 aaKnown RBP11.03□□□□□ -0.64
POLB-216ENST00000530566 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.64
POLB-216ENST00000530566 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 RASSF7Q02833 373 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 DGKZQ13574 1117 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
POLB-216ENST00000530566 TREML4Q6UXN2 200 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 HPS1Q92902 700 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 SBF1O95248 1867 aa11.02□□□□□ -0.65
POLB-216ENST00000530566 TAF1LQ8IZX4 1826 aa11.01□□□□□ -0.65
POLB-216ENST00000530566 RASSF10A6NK89 507 aa11.01□□□□□ -0.65
POLB-216ENST00000530566 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
POLB-216ENST00000530566 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
POLB-216ENST00000530566 SIAH2O43255 324 aa11□□□□□ -0.65
POLB-216ENST00000530566 SH3BP2P78314 561 aa11□□□□□ -0.65
POLB-216ENST00000530566 HABP4Q5JVS0 413 aaKnown RBP11□□□□□ -0.65
POLB-216ENST00000530566 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
POLB-216ENST00000530566 ANKRD24Q8TF21 1146 aa11□□□□□ -0.65
POLB-216ENST00000530566 KIFC2Q96AC6 838 aa11□□□□□ -0.65
POLB-216ENST00000530566 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
POLB-216ENST00000530566 KDM6AO15550 1401 aaPredicted RBP11□□□□□ -0.65
POLB-216ENST00000530566 UBR3Q6ZT12 1888 aa11□□□□□ -0.65
POLB-216ENST00000530566 SPTLC1O15269 473 aa10.99□□□□□ -0.65
POLB-216ENST00000530566 PARP3Q9Y6F1 533 aa10.99□□□□□ -0.65
POLB-216ENST00000530566 TMF1P82094 1093 aa10.98□□□□□ -0.65
POLB-216ENST00000530566 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 NBPF15Q8N660 670 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
POLB-216ENST00000530566 BAP1Q92560 729 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 CABP1Q9NZU7 370 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 ABT1Q9ULW3 272 aaKnown RBP10.97□□□□□ -0.65
POLB-216ENST00000530566 NFAT5O94916 1531 aa10.97□□□□□ -0.65
POLB-216ENST00000530566 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
POLB-216ENST00000530566 VARSP26640 1264 aaKnown RBP10.96□□□□□ -0.65
POLB-216ENST00000530566 CTHP32929 405 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms