RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 ZNF622Q969S3 477 aaKnown RBP eCLIP5.88□□□□□ -1.47
GMDS-207ENST00000530459 MEIS3Q99687 375 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 UPF3BQ9BZI7 483 aaKnown RBP5.88□□□□□ -1.47
GMDS-207ENST00000530459 FAM117AQ9C073 453 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 LSG1Q9H089 658 aaKnown RBP5.88□□□□□ -1.47
GMDS-207ENST00000530459 GGNBP2Q9H3C7 697 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 ZSWIM6Q9HCJ5 1215 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 ST7Q9NRC1 585 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 HYPKQ9NX55 129 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 SOS1Q07889 1333 aaPredicted RBP5.88□□□□□ -1.47
GMDS-207ENST00000530459 TTC41PQ6P2S7 1318 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 USP42Q9H9J4 1324 aaKnown RBP5.88□□□□□ -1.47
GMDS-207ENST00000530459 PXDNLA1KZ92 1463 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 ATP7BP35670 1465 aa5.88□□□□□ -1.47
GMDS-207ENST00000530459 CACNA1FO60840 1977 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 GOLGA6L19H0YKK7 550 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 DPYSL4O14531 572 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 NRDCO43847 1150 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 RAB11FIP3O75154 756 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 TADA3O75528 432 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 GNAI2P04899 355 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 GNAI3P08754 354 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 GSCP56915 257 aaPredicted RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 TUBB4BP68371 445 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 STX1AQ16623 288 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 ARHGAP29Q52LW3 1261 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 E4F1Q66K89 784 aaPredicted RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 ATL3Q6DD88 541 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 HDGFL2Q7Z4V5 671 aaPredicted RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 GPR161Q8N6U8 529 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 UBXN4Q92575 508 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 SECISBP2LQ93073 1101 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 GTF3C6Q969F1 213 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 SMARCE1Q969G3 411 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 KIF12Q96FN5 646 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 BPIFA3Q9BQP9 254 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 DACT1Q9NYF0 836 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 RRP15Q9Y3B9 282 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 LRRFIP2Q9Y608 721 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 PTPRMP28827 1452 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 NRKQ7Z2Y5 1582 aa5.87□□□□□ -1.47
GMDS-207ENST00000530459 MAP2P11137 1827 aaKnown RBP5.87□□□□□ -1.47
GMDS-207ENST00000530459 ERCC6L2Q5T890 1561 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 APBB1O00213 710 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 MAP2K7O14733 419 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 ATP2B1P20020 1258 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 OAS2P29728 719 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 PSME1Q06323 249 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 ST3GAL1Q11201 340 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 FLIIQ13045 1269 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 SMC1AQ14683 1233 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 LRRFIP1Q32MZ4 808 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 CC2D1AQ6P1N0 951 aaPredicted RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 CCDC191Q8NCU4 936 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.86□□□□□ -1.47
GMDS-207ENST00000530459 NEK11Q8NG66 645 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 LEO1Q8WVC0 666 aaPredicted RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 HNRNPLLQ8WVV9 542 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 RUFY2Q8WXA3 655 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 SIRT1Q96EB6 747 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 PPP1R13BQ96KQ4 1090 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 CEP89Q96ST8 783 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 MPHOSPH8Q99549 860 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 UTP14AQ9BVJ6 771 aaKnown RBP5.86□□□□□ -1.47
GMDS-207ENST00000530459 SNRKQ9NRH2 765 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 JRKLQ9Y4A0 524 aa5.86□□□□□ -1.47
GMDS-207ENST00000530459 XRN1Q8IZH2 1706 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 DLC1Q96QB1 1528 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 ADCY9O60503 1353 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 MAP3K5Q99683 1374 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 CCDC151A5D8V7 595 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 GOLGA6L4A6NEF3 574 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 GOLGA6L9A6NEM1 432 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 SPDYE16A6NNV3 312 aaPredicted RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 KIF3BO15066 747 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 MYO1BO43795 1136 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 KIF1CO43896 1103 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 BRD2P25440 801 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 CORO7P57737 925 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 SRPK2P78362 688 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 BRD3Q15059 726 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 PDIA6Q15084 440 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 ANKRD1Q15327 319 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 FOXD4L6Q3SYB3 417 aaPredicted RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 TTC31Q49AM3 519 aaPredicted RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 LARP1BQ659C4 914 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 TRIM65Q6PJ69 517 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 FOXD4L3Q6VB84 417 aaPredicted RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 NOL8Q76FK4 1167 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 RSRC2Q7L4I2 434 aaKnown RBP5.85□□□□□ -1.47
GMDS-207ENST00000530459 C10orf67Q8IYJ2 551 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 CEP120Q8N960 986 aa5.85□□□□□ -1.47
GMDS-207ENST00000530459 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms