RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 NEFMP07197 916 aa14.96□□□□□ -0.01
SF3B2-208ENST00000529994 SUPT20HQ8NEM7 779 aa14.96□□□□□ -0.01
SF3B2-208ENST00000529994 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.01
SF3B2-208ENST00000529994 HCLS1P14317 486 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-208ENST00000529994 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
SF3B2-208ENST00000529994 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 CDC37L1Q7L3B6 337 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 MPNDQ8N594 471 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 RTFDC1Q9BY42 306 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-208ENST00000529994 VPS33BQ9H267 617 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 PGAP2Q9UHJ9 254 aa14.95□□□□□ -0.02
SF3B2-208ENST00000529994 CNOT7Q9UIV1 285 aaKnown RBP14.95□□□□□ -0.02
SF3B2-208ENST00000529994 PDE4DIPQ5VU43 2346 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 HUNKP57058 714 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 TNIP1Q15025 636 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 SLC10A5Q5PT55 438 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 SP8Q8IXZ3 490 aa14.94□□□□□ -0.02
SF3B2-208ENST00000529994 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
SF3B2-208ENST00000529994 YDJCA8MPS7 323 aa14.93□□□□□ -0.02
SF3B2-208ENST00000529994 BBOX1O75936 387 aa14.93□□□□□ -0.02
SF3B2-208ENST00000529994 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
SF3B2-208ENST00000529994 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
SF3B2-208ENST00000529994 ZBTB12Q9Y330 459 aaPredicted RBP14.93□□□□□ -0.02
SF3B2-208ENST00000529994 H7C1D1 291 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 NOGQ13253 232 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 PDIA6Q15084 440 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 NFE2L2Q16236 605 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 DDX46Q7L014 1031 aaKnown RBP14.92□□□□□ -0.02
SF3B2-208ENST00000529994 SAMD7Q7Z3H4 446 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 LRP10Q7Z4F1 713 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
SF3B2-208ENST00000529994 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
SF3B2-208ENST00000529994 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
SF3B2-208ENST00000529994 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
SF3B2-208ENST00000529994 ERBB4Q15303 1308 aa14.91□□□□□ -0.02
SF3B2-208ENST00000529994 DUOX1Q9NRD9 1551 aa14.9□□□□□ -0.02
SF3B2-208ENST00000529994 EGFRP00533 1210 aa14.9□□□□□ -0.02
SF3B2-208ENST00000529994 GRAPQ13588 217 aa14.9□□□□□ -0.02
SF3B2-208ENST00000529994 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-208ENST00000529994 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
SF3B2-208ENST00000529994 NLRP10Q86W26 655 aa14.9□□□□□ -0.02
SF3B2-208ENST00000529994 GRAPLQ8TC17 118 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-208ENST00000529994 TRMT112Q9UI30 125 aaKnown RBP14.9□□□□□ -0.02
SF3B2-208ENST00000529994 PSMD14O00487 310 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 SOX10P56693 466 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 RGMBQ6NW40 437 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 KRT26Q7Z3Y9 468 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 DBNDD1Q9H9R9 158 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 AKAP11Q9UKA4 1901 aa14.89□□□□□ -0.03
SF3B2-208ENST00000529994 FAM155AB1AL88 458 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-208ENST00000529994 ADM5C9JUS6 153 aa14.88□□□□□ -0.03
SF3B2-208ENST00000529994 RIMBP2O15034 1052 aa14.88□□□□□ -0.03
SF3B2-208ENST00000529994 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-208ENST00000529994 XAGE3Q8WTP9 111 aa14.88□□□□□ -0.03
SF3B2-208ENST00000529994 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
SF3B2-208ENST00000529994 SH3TC1Q8TE82 1336 aa14.88□□□□□ -0.03
SF3B2-208ENST00000529994 TRPA1O75762 1119 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 ZNF157P51786 506 aaPredicted RBP14.87□□□□□ -0.03
SF3B2-208ENST00000529994 WASHC4Q2M389 1173 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 C2orf69Q8N8R5 385 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 KCNQ5Q9NR82 932 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 PCDH10Q9P2E7 1040 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 NSFL1CQ9UNZ2 370 aaKnown RBP14.87□□□□□ -0.03
SF3B2-208ENST00000529994 MAPK8IP3Q9UPT6 1336 aa14.87□□□□□ -0.03
SF3B2-208ENST00000529994 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
SF3B2-208ENST00000529994 TCIRG1Q13488 830 aa14.86□□□□□ -0.03
SF3B2-208ENST00000529994 DOK7Q18PE1 504 aa14.86□□□□□ -0.03
SF3B2-208ENST00000529994 HSP90AB3PQ58FF7 597 aa14.86□□□□□ -0.03
SF3B2-208ENST00000529994 DCPSQ96C86 337 aaKnown RBP14.86□□□□□ -0.03
SF3B2-208ENST00000529994 RNF186Q9NXI6 227 aa14.86□□□□□ -0.03
SF3B2-208ENST00000529994 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
SF3B2-208ENST00000529994 COL4A1P02462 1669 aa14.85□□□□□ -0.03
SF3B2-208ENST00000529994 C6orf229H3BNL8 230 aa14.85□□□□□ -0.03
SF3B2-208ENST00000529994 DPF2Q92785 391 aa14.85□□□□□ -0.03
SF3B2-208ENST00000529994 CELF1Q92879 486 aaKnown RBP14.85□□□□□ -0.03
SF3B2-208ENST00000529994 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
SF3B2-208ENST00000529994 RTL5Q5HYW3 569 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-208ENST00000529994 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
SF3B2-208ENST00000529994 SAGE1Q9NXZ1 904 aa14.84□□□□□ -0.03
SF3B2-208ENST00000529994 POLLQ9UGP5 575 aa14.84□□□□□ -0.03
SF3B2-208ENST00000529994 ASTN2O75129 1339 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-208ENST00000529994 RTL9Q8NET4 1388 aa14.84□□□□□ -0.03
SF3B2-208ENST00000529994 SCN9AQ15858 1988 aa14.84□□□□□ -0.03
SF3B2-208ENST00000529994 ECE2O60344 883 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 RIPK4P57078 832 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 GPSM2P81274 684 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 KRT24Q2M2I5 525 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 TMC4Q7Z404 712 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 FAM89AQ96GI7 184 aa14.83□□□□□ -0.04
SF3B2-208ENST00000529994 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
SF3B2-208ENST00000529994 CSRNP1Q96S65 589 aa14.82□□□□□ -0.04
SF3B2-208ENST00000529994 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
SF3B2-208ENST00000529994 GGA3Q9NZ52 723 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms