RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZBTB40Q9NUA8 1239 aa9.87□□□□□ -0.83
SSBP3-211ENST00000528787 DDX60Q8IY21 1712 aaKnown RBP9.87□□□□□ -0.83
SSBP3-211ENST00000528787 CSF1RP07333 972 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 NBPF7P0C2Y1 421 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-211ENST00000528787 RLBP1P12271 317 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 HOXA10P31260 410 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-211ENST00000528787 RABL6Q3YEC7 729 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-211ENST00000528787 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 ERC1Q8IUD2 1116 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 MEIS3Q99687 375 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 RWDD1Q9H446 243 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-211ENST00000528787 CHMP3Q9Y3E7 222 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 DLEC1Q9Y238 1755 aa9.86□□□□□ -0.83
SSBP3-211ENST00000528787 SRGNP10124 158 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 PTGER2P43116 358 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 CASP7P55210 303 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 SMIM5Q71RC9 77 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 C2CD5Q86YS7 1000 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 TTLL11Q8NHH1 800 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 PIM2Q9P1W9 311 aa9.85□□□□□ -0.83
SSBP3-211ENST00000528787 LRRFIP2Q9Y608 721 aaKnown RBP9.85□□□□□ -0.83
SSBP3-211ENST00000528787 SRGAP3O43295 1099 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-211ENST00000528787 ATP8B2P98198 1209 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 GRAPQ13588 217 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-211ENST00000528787 LMBR1LQ6UX01 489 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 TTLL6Q8N841 843 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 GRAPLQ8TC17 118 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-211ENST00000528787 CRBNQ96SW2 442 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 PDGFDQ9GZP0 370 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-211ENST00000528787 ANKRD2Q9GZV1 360 aa9.84□□□□□ -0.83
SSBP3-211ENST00000528787 BICC1Q9H694 974 aaKnown RBP9.84□□□□□ -0.83
SSBP3-211ENST00000528787 ANKRD31Q8N7Z5 1873 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 CIAO1O76071 339 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 ITGA6P23229 1130 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 RPS8P62241 208 aaKnown RBP9.83□□□□□ -0.84
SSBP3-211ENST00000528787 G3BP1Q13283 466 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSBP3-211ENST00000528787 DALRD3Q5D0E6 543 aaKnown RBP9.83□□□□□ -0.84
SSBP3-211ENST00000528787 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 ANKRD44Q8N8A2 993 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 SUPT20HQ8NEM7 779 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSBP3-211ENST00000528787 GCC1Q96CN9 775 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 SUCLG2Q96I99 432 aa9.83□□□□□ -0.84
SSBP3-211ENST00000528787 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 RAB11FIP3O75154 756 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 IL15P40933 162 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-211ENST00000528787 FOXO4P98177 505 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 OS9Q13438 667 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-211ENST00000528787 HDAC1Q13547 482 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-211ENST00000528787 C20orf194Q5TEA3 1177 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 LDHAL6AQ6ZMR3 332 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 RTKN2Q8IZC4 609 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 SSH3Q8TE77 659 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 VPS33BQ9H267 617 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 BSDC1Q9NW68 430 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-211ENST00000528787 AKAP2Q9Y2D5 859 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 ABCC12Q96J65 1359 aa9.82□□□□□ -0.84
SSBP3-211ENST00000528787 CEP85Q6P2H3 762 aa9.81□□□□□ -0.84
SSBP3-211ENST00000528787 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
SSBP3-211ENST00000528787 ARFGEF1Q9Y6D6 1849 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-211ENST00000528787 GRIN3BO60391 1043 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 EYA3Q99504 573 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 FHDC1Q9C0D6 1143 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-211ENST00000528787 GREM2Q9H772 168 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 CEP126Q9P2H0 1117 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 TNNQ9UQP3 1299 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 ATP6V0A2Q9Y487 856 aa9.8□□□□□ -0.84
SSBP3-211ENST00000528787 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
SSBP3-211ENST00000528787 EYA2O00167 538 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
SSBP3-211ENST00000528787 DPEP1P16444 411 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 KCNJ4P48050 445 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 POLA2Q14181 598 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 CCDC93Q567U6 631 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 PRPF40BQ6NWY9 871 aaKnown RBP9.79□□□□□ -0.84
SSBP3-211ENST00000528787 EXOC6Q8TAG9 804 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 CCDC136Q96JN2 1154 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 SYT17Q9BSW7 474 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 ANKIB1Q9P2G1 1089 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 LEMD3Q9Y2U8 911 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 NOP58Q9Y2X3 529 aaKnown RBP9.79□□□□□ -0.84
SSBP3-211ENST00000528787 TNRC6CQ9HCJ0 1690 aaKnown RBP9.79□□□□□ -0.84
SSBP3-211ENST00000528787 XDHP47989 1333 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 CACNA1SQ13698 1873 aa9.79□□□□□ -0.84
SSBP3-211ENST00000528787 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
SSBP3-211ENST00000528787 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
SSBP3-211ENST00000528787 METTL24Q5JXM2 366 aa9.78□□□□□ -0.84
SSBP3-211ENST00000528787 CLASRPQ8N2M8 674 aaKnown RBP9.78□□□□□ -0.84
SSBP3-211ENST00000528787 JARID2Q92833 1246 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-211ENST00000528787 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms