RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 CSF1RP07333 972 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
RPS3-210ENST00000528439 NFIXQ14938 502 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
RPS3-210ENST00000528439 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
RPS3-210ENST00000528439 LRRCC1Q9C099 1032 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 SIL1Q9H173 461 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 COPRSQ9NQ92 184 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
RPS3-210ENST00000528439 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 SASH1O94885 1247 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
RPS3-210ENST00000528439 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 GREM2Q9H772 168 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
RPS3-210ENST00000528439 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
RPS3-210ENST00000528439 PDE8AO60658 829 aa12.42□□□□□ -0.42
RPS3-210ENST00000528439 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
RPS3-210ENST00000528439 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
RPS3-210ENST00000528439 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
RPS3-210ENST00000528439 DDR1Q08345 913 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
RPS3-210ENST00000528439 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 SETDB2Q96T68 719 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
RPS3-210ENST00000528439 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
RPS3-210ENST00000528439 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
RPS3-210ENST00000528439 ITGA6P23229 1130 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.42
RPS3-210ENST00000528439 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 RTL9Q8NET4 1388 aa12.4□□□□□ -0.42
RPS3-210ENST00000528439 ZNF609O15014 1411 aa12.39□□□□□ -0.43
RPS3-210ENST00000528439 TM4SF1P30408 202 aa12.39□□□□□ -0.43
RPS3-210ENST00000528439 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.435e-10■□□□□ 8.3
RPS3-210ENST00000528439 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
RPS3-210ENST00000528439 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
RPS3-210ENST00000528439 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
RPS3-210ENST00000528439 TAF1P21675 1872 aa12.39□□□□□ -0.43
RPS3-210ENST00000528439 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 EYA2O00167 538 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
RPS3-210ENST00000528439 CIAO1O76071 339 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 MX1P20591 662 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 PDE1AP54750 535 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 TFCP2Q12800 502 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
RPS3-210ENST00000528439 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 TTC22Q5TAA0 569 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
RPS3-210ENST00000528439 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 SEC31BQ9NQW1 1179 aa12.38□□□□□ -0.43
RPS3-210ENST00000528439 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
RPS3-210ENST00000528439 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
RPS3-210ENST00000528439 AACSQ86V21 672 aa12.37□□□□□ -0.43
RPS3-210ENST00000528439 CNBD1Q8NA66 436 aa12.37□□□□□ -0.43
RPS3-210ENST00000528439 OSBPL3Q9H4L5 887 aa12.37□□□□□ -0.43
RPS3-210ENST00000528439 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
RPS3-210ENST00000528439 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
RPS3-210ENST00000528439 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 TNNI3KQ59H18 835 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 BMP2KLQ5H9B9 411 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
RPS3-210ENST00000528439 FPGT-TNNI3KV9GXZ4 949 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
RPS3-210ENST00000528439 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 AOX1Q06278 1338 aa12.36□□□□□ -0.43
RPS3-210ENST00000528439 SERPINB2P05120 415 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
RPS3-210ENST00000528439 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
RPS3-210ENST00000528439 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
RPS3-210ENST00000528439 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 PI4K2BQ8TCG2 481 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
RPS3-210ENST00000528439 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
RPS3-210ENST00000528439 R3HDM1Q15032 1099 aaKnown RBP12.34□□□□□ -0.43
RPS3-210ENST00000528439 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
RPS3-210ENST00000528439 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
RPS3-210ENST00000528439 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
RPS3-210ENST00000528439 MMP10P09238 476 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms