RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
CAPN1-207ENST00000527189 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-207ENST00000527189 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-207ENST00000527189 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
CAPN1-207ENST00000527189 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
CAPN1-207ENST00000527189 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-207ENST00000527189 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
CAPN1-207ENST00000527189 MPNDQ8N594 471 aa17.26■□□□□ 0.35
CAPN1-207ENST00000527189 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-207ENST00000527189 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
CAPN1-207ENST00000527189 EPHX2P34913 555 aa17.25■□□□□ 0.35
CAPN1-207ENST00000527189 WDR63Q8IWG1 891 aa17.25■□□□□ 0.35
CAPN1-207ENST00000527189 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
CAPN1-207ENST00000527189 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-207ENST00000527189 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
CAPN1-207ENST00000527189 TNRC18O15417 2968 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-207ENST00000527189 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
CAPN1-207ENST00000527189 LAMB2P55268 1798 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-207ENST00000527189 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 AOC3Q16853 763 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-207ENST00000527189 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 MYD88Q99836 296 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-207ENST00000527189 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
CAPN1-207ENST00000527189 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-207ENST00000527189 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CAPN1-207ENST00000527189 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
CAPN1-207ENST00000527189 GJA3Q9Y6H8 435 aa17.22■□□□□ 0.35
CAPN1-207ENST00000527189 COL4A5P29400 1685 aa17.21■□□□□ 0.35
CAPN1-207ENST00000527189 FOXN1O15353 648 aa17.21■□□□□ 0.35
CAPN1-207ENST00000527189 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
CAPN1-207ENST00000527189 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-207ENST00000527189 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-207ENST00000527189 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
CAPN1-207ENST00000527189 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
CAPN1-207ENST00000527189 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
CAPN1-207ENST00000527189 PASKQ96RG2 1323 aa17.21■□□□□ 0.34
CAPN1-207ENST00000527189 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 PDE8AO60658 829 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-207ENST00000527189 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
CAPN1-207ENST00000527189 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
CAPN1-207ENST00000527189 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 SCNN1DP51172 638 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 CXCL9Q07325 125 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 TNIP1Q15025 636 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 CCDC152Q4G0S7 254 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-207ENST00000527189 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
CAPN1-207ENST00000527189 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
CAPN1-207ENST00000527189 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
CAPN1-207ENST00000527189 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
CAPN1-207ENST00000527189 EPS15P42566 896 aa17.17■□□□□ 0.34
CAPN1-207ENST00000527189 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
CAPN1-207ENST00000527189 PRDM10Q9NQV6 1147 aa17.17■□□□□ 0.34
CAPN1-207ENST00000527189 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
CAPN1-207ENST00000527189 ADAMTSL1Q8N6G6 1762 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 VAMP4O75379 141 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 IGKV5-2P06315 115 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 EYA3Q99504 573 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
CAPN1-207ENST00000527189 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
CAPN1-207ENST00000527189 TAF1P21675 1872 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
CAPN1-207ENST00000527189 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
CAPN1-207ENST00000527189 GPSM2P81274 684 aa17.15■□□□□ 0.34
CAPN1-207ENST00000527189 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
CAPN1-207ENST00000527189 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
CAPN1-207ENST00000527189 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 FLIIQ13045 1269 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-207ENST00000527189 G2E3Q7L622 706 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
CAPN1-207ENST00000527189 H7C1W4 665 aa17.13■□□□□ 0.33
CAPN1-207ENST00000527189 EXOSC9Q06265 439 aaKnown RBP17.13■□□□□ 0.33
CAPN1-207ENST00000527189 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
CAPN1-207ENST00000527189 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
CAPN1-207ENST00000527189 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
CAPN1-207ENST00000527189 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
CAPN1-207ENST00000527189 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 RAD17O75943 681 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-207ENST00000527189 CTSWP56202 376 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-207ENST00000527189 CWF19L2Q2TBE0 894 aaKnown RBP17.12■□□□□ 0.33
CAPN1-207ENST00000527189 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms