RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
CAPN1-205ENST00000526954 RTL9Q8NET4 1388 aa20.7■□□□□ 0.9
CAPN1-205ENST00000526954 SRGNP10124 158 aa20.69■□□□□ 0.9
CAPN1-205ENST00000526954 IRX6P78412 446 aaPredicted RBP20.69■□□□□ 0.9
CAPN1-205ENST00000526954 CCDC152Q4G0S7 254 aa20.69■□□□□ 0.9
CAPN1-205ENST00000526954 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
CAPN1-205ENST00000526954 EXOC6Q8TAG9 804 aa20.69■□□□□ 0.9
CAPN1-205ENST00000526954 H0YIN7 160 aa20.68■□□□□ 0.9
CAPN1-205ENST00000526954 HOXA10P31260 410 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-205ENST00000526954 MTX1Q13505 466 aa20.68■□□□□ 0.9
CAPN1-205ENST00000526954 C2CD5Q86YS7 1000 aa20.68■□□□□ 0.9
CAPN1-205ENST00000526954 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-205ENST00000526954 NPR1P16066 1061 aa20.67■□□□□ 0.9
CAPN1-205ENST00000526954 MASTLQ96GX5 879 aa20.67■□□□□ 0.9
CAPN1-205ENST00000526954 STYK1Q6J9G0 422 aa20.66■□□□□ 0.9
CAPN1-205ENST00000526954 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
CAPN1-205ENST00000526954 FHDC1Q9C0D6 1143 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-205ENST00000526954 GREM2Q9H772 168 aa20.66■□□□□ 0.9
CAPN1-205ENST00000526954 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
CAPN1-205ENST00000526954 BRCA1P38398 1863 aaKnown RBP20.66■□□□□ 0.9
CAPN1-205ENST00000526954 TAF1P21675 1872 aa20.65■□□□□ 0.9
CAPN1-205ENST00000526954 DPEP1P16444 411 aa20.65■□□□□ 0.9
CAPN1-205ENST00000526954 KCNA3P22001 575 aa20.65■□□□□ 0.9
CAPN1-205ENST00000526954 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
CAPN1-205ENST00000526954 RBM17Q96I25 401 aaKnown RBP20.65■□□□□ 0.9
CAPN1-205ENST00000526954 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
CAPN1-205ENST00000526954 NEFLP07196 543 aa20.64■□□□□ 0.89
CAPN1-205ENST00000526954 CHRNA5P30532 468 aa20.64■□□□□ 0.89
CAPN1-205ENST00000526954 FAM161AQ3B820 660 aa20.64■□□□□ 0.89
CAPN1-205ENST00000526954 CEP85Q6P2H3 762 aa20.64■□□□□ 0.89
CAPN1-205ENST00000526954 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
CAPN1-205ENST00000526954 RPAP2Q8IXW5 612 aaPredicted RBP20.64■□□□□ 0.89
CAPN1-205ENST00000526954 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
CAPN1-205ENST00000526954 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
CAPN1-205ENST00000526954 ITGA6P23229 1130 aa20.63■□□□□ 0.89
CAPN1-205ENST00000526954 IFIT5Q13325 482 aaKnown RBP20.63■□□□□ 0.89
CAPN1-205ENST00000526954 CCDC85AQ96PX6 553 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-205ENST00000526954 SYT17Q9BSW7 474 aa20.63■□□□□ 0.89
CAPN1-205ENST00000526954 SEC31BQ9NQW1 1179 aa20.63■□□□□ 0.89
CAPN1-205ENST00000526954 ANKRD18BA2A2Z9 1011 aa20.62■□□□□ 0.89
CAPN1-205ENST00000526954 ALDH1B1P30837 517 aa20.62■□□□□ 0.89
CAPN1-205ENST00000526954 POLA2Q14181 598 aa20.62■□□□□ 0.89
CAPN1-205ENST00000526954 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
CAPN1-205ENST00000526954 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
CAPN1-205ENST00000526954 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-205ENST00000526954 GRAPQ13588 217 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 NLGN2Q8NFZ4 835 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 GRAPLQ8TC17 118 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-205ENST00000526954 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 CNKSR1Q969H4 720 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 CDC5LQ99459 802 aaKnown RBP20.61■□□□□ 0.89
CAPN1-205ENST00000526954 PCDHB15Q9Y5E8 787 aa20.61■□□□□ 0.89
CAPN1-205ENST00000526954 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 BBOX1O75936 387 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 SIRT2Q8IXJ6 389 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.895e-7■■■□□ 17.3
CAPN1-205ENST00000526954 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 COL4A1P02462 1669 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
CAPN1-205ENST00000526954 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
CAPN1-205ENST00000526954 CELF1Q92879 486 aaKnown RBP20.59■□□□□ 0.89
CAPN1-205ENST00000526954 SPEF2Q9C093 1822 aa20.59■□□□□ 0.89
CAPN1-205ENST00000526954 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
CAPN1-205ENST00000526954 TMC4Q7Z404 712 aa20.58■□□□□ 0.89
CAPN1-205ENST00000526954 ANKRD18AQ8IVF6 992 aa20.58■□□□□ 0.89
CAPN1-205ENST00000526954 TTLL6Q8N841 843 aa20.58■□□□□ 0.89
CAPN1-205ENST00000526954 COPRSQ9NQ92 184 aa20.58■□□□□ 0.89
CAPN1-205ENST00000526954 HMMRO75330 724 aa20.57■□□□□ 0.88
CAPN1-205ENST00000526954 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
CAPN1-205ENST00000526954 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-205ENST00000526954 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
CAPN1-205ENST00000526954 IGHMBP2P38935 993 aaKnown RBP20.56■□□□□ 0.88
CAPN1-205ENST00000526954 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
CAPN1-205ENST00000526954 PRPF40BQ6NWY9 871 aaKnown RBP20.56■□□□□ 0.88
CAPN1-205ENST00000526954 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-205ENST00000526954 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
CAPN1-205ENST00000526954 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
CAPN1-205ENST00000526954 PPEF1O14829 653 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-205ENST00000526954 DALRD3Q5D0E6 543 aaKnown RBP20.55■□□□□ 0.88
CAPN1-205ENST00000526954 KLHDC4Q8TBB5 520 aa20.55■□□□□ 0.88
CAPN1-205ENST00000526954 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
CAPN1-205ENST00000526954 LDHAL6AQ6ZMR3 332 aa20.54■□□□□ 0.88
CAPN1-205ENST00000526954 C7orf43Q8WVR3 580 aa20.54■□□□□ 0.88
CAPN1-205ENST00000526954 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
CAPN1-205ENST00000526954 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
CAPN1-205ENST00000526954 SRCAPQ6ZRS2 3230 aa20.53■□□□□ 0.88
CAPN1-205ENST00000526954 CIAO1O76071 339 aa20.53■□□□□ 0.88
CAPN1-205ENST00000526954 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-205ENST00000526954 SP8Q8IXZ3 490 aa20.53■□□□□ 0.88
CAPN1-205ENST00000526954 PA2G4Q9UQ80 394 aaKnown RBP20.53■□□□□ 0.88
CAPN1-205ENST00000526954 RIPOR2Q9Y4F9 1068 aa20.53■□□□□ 0.88
CAPN1-205ENST00000526954 EYA2O00167 538 aa20.52■□□□□ 0.88
CAPN1-205ENST00000526954 A0A1B0GUL6 1792 aa20.51■□□□□ 0.87
CAPN1-205ENST00000526954 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
CAPN1-205ENST00000526954 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
CAPN1-205ENST00000526954 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
CAPN1-205ENST00000526954 PUS3Q9BZE2 481 aaKnown RBP20.51■□□□□ 0.87
CAPN1-205ENST00000526954 CNNM1Q9NRU3 951 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms