RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 SLC26A6Q9BXS9 759 aa10.73□□□□□ -0.69
CTNND1-213ENST00000526357 SSFA2P28290 1259 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 STAT6P42226 847 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 UBE2HP62256 183 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 PIP4K2BP78356 416 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 NCBP1Q09161 790 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 STIM2Q9P246 746 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 ORC3Q9UBD5 711 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 TRMT1LQ7Z2T5 733 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 ZSWIM4Q9H7M6 989 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 FAM169AQ9Y6X4 670 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 SETDB1Q15047 1291 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 KRT83P78385 493 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 JAKMIP2Q96AA8 810 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 CRNKL1Q9BZJ0 848 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 EEF2P13639 858 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
CTNND1-213ENST00000526357 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
CTNND1-213ENST00000526357 ZNF644Q9H582 1327 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-213ENST00000526357 C6orf229H3BNL8 230 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 CIB2O75838 187 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 FAM13AO94988 1023 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 GAS8O95995 478 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 SYKP43405 635 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 CCDC50Q8IVM0 306 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
CTNND1-213ENST00000526357 PANK2Q9BZ23 570 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 GTPBP4Q9BZE4 634 aaKnown RBP10.71□□□□□ -0.69
CTNND1-213ENST00000526357 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 TRIM7Q9C029 511 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 KRT23Q9C075 422 aa10.71□□□□□ -0.69
CTNND1-213ENST00000526357 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-213ENST00000526357 CCT6BQ92526 530 aa10.71□□□□□ -0.7
CTNND1-213ENST00000526357 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.7
CTNND1-213ENST00000526357 CTAGE9A4FU28 777 aa10.71□□□□□ -0.7
CTNND1-213ENST00000526357 KIF3CO14782 793 aa10.71□□□□□ -0.7
CTNND1-213ENST00000526357 CCDC117Q8IWD4 279 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-213ENST00000526357 PPFIBP2Q8ND30 876 aa10.71□□□□□ -0.7
CTNND1-213ENST00000526357 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 B4DLN1 442 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 ZFYP08048 801 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 TMEM110-MUSTN1A8MSY1 372 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 SAMD15Q9P1V8 674 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 MTRF1LQ9UGC7 380 aaKnown RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 UQCRFS1P1P0C7P4 283 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 GJC1P36383 396 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 ERCC6LQ2NKX8 1250 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 MICALL1Q8N3F8 863 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 GOLGA1Q92805 767 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 PLCB3Q01970 1234 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 VTI1AQ96AJ9 217 aa10.7□□□□□ -0.7
CTNND1-213ENST00000526357 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-213ENST00000526357 PTPRCP08575 1304 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 PSMA7O14818 248 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 ZC3H6P61129 1189 aaKnown RBP10.69□□□□□ -0.7
CTNND1-213ENST00000526357 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
CTNND1-213ENST00000526357 PLEKHH2Q8IVE3 1493 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 CLGNO14967 610 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 CRCPO75575 148 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 CEP128Q6ZU80 1094 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 KCNG4Q8TDN1 519 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 WTAPQ15007 396 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 MICU3Q86XE3 530 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-213ENST00000526357 RSRC1Q96IZ7 334 aaKnown RBP10.69□□□□□ -0.7
CTNND1-213ENST00000526357 ECHDC1Q9NTX5 307 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 KRT86O43790 486 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 ATP5DP30049 168 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 MCM10Q7L590 875 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 CPLX4Q7Z7G2 160 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 ARFGAP2Q8N6H7 521 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 SWAP70Q9UH65 585 aa10.69□□□□□ -0.7
CTNND1-213ENST00000526357 GNAQP50148 359 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 CEP120Q8N960 986 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 MAK16Q9BXY0 300 aaKnown RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 LACTBP83111 547 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 CNNM2Q9H8M5 875 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 FAM184BQ9ULE4 1060 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 DHX29Q7Z478 1369 aaKnown RBP10.68□□□□□ -0.7
CTNND1-213ENST00000526357 BICDL2A1A5D9 508 aa10.68□□□□□ -0.7
CTNND1-213ENST00000526357 EBAG9O00559 213 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms