RNA–Protein interactions for RNA: ENST00000525358.1

EDRF1-210, Transcript of erythroid differentiation regulatory factor 1, human

TSL 3

Gene EDRF1, Length 436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDRF1-210	ENST00000525358	SRCIN1	Q9C0H9	1055 aa		13.92	□□□□□ -0.18
EDRF1-210	ENST00000525358	KIAA1551	Q9HCM1	1747 aa		13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358		H7C1W4	665 aa		13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358	BCAR3	O75815	825 aa		13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358	ALDH1L1	O75891	902 aa		13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358	JARID2	Q92833	1246 aa	Predicted RBP	13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.91	□□□□□ -0.18
EDRF1-210	ENST00000525358	KIF16B	Q96L93	1317 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	CDHR2	Q9BYE9	1310 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	PDE8A	O60658	829 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	SF3B3	Q15393	1217 aa	Known RBP	13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	ARHGAP27	Q6ZUM4	889 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	C3orf67	Q6ZVT6	689 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	CRAMP1	Q96RY5	1269 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	CACNA1F	O60840	1977 aa		13.9	□□□□□ -0.18
EDRF1-210	ENST00000525358	DDX46	Q7L014	1031 aa	Known RBP	13.89	□□□□□ -0.19
EDRF1-210	ENST00000525358	FRAT1	Q92837	279 aa	Predicted RBP	13.89	□□□□□ -0.19
EDRF1-210	ENST00000525358	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.89	□□□□□ -0.19
EDRF1-210	ENST00000525358	ANKRD31	Q8N7Z5	1873 aa		13.89	□□□□□ -0.19
EDRF1-210	ENST00000525358	C21orf2	O43822	256 aa		13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	CCT4	P50991	539 aa	Known RBP	13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	SOGA3	Q5TF21	947 aa		13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	PRPF40B	Q6NWY9	871 aa	Known RBP	13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	UBE3B	Q7Z3V4	1068 aa		13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	PLCD3	Q8N3E9	789 aa		13.88	□□□□□ -0.19
EDRF1-210	ENST00000525358	GRM8	O00222	908 aa		13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	BBOX1	O75936	387 aa		13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	CASP7	P55210	303 aa		13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	CCDC152	Q4G0S7	254 aa		13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	ZKSCAN2	Q63HK3	967 aa		13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	TMX4	Q9H1E5	349 aa	Predicted RBP	13.87	□□□□□ -0.19
EDRF1-210	ENST00000525358	CC2D2B	Q6DHV5	1058 aa		13.86	□□□□□ -0.19
EDRF1-210	ENST00000525358	ATF7IP	Q6VMQ6	1270 aa		13.86	□□□□□ -0.19
EDRF1-210	ENST00000525358	C7orf43	Q8WVR3	580 aa		13.86	□□□□□ -0.19
EDRF1-210	ENST00000525358	PLA2G12B	Q9BX93	195 aa		13.86	□□□□□ -0.19
EDRF1-210	ENST00000525358	PPEF1	O14829	653 aa	Predicted RBP	13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	VASP	P50552	380 aa	Predicted RBP	13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	GRAP	Q13588	217 aa		13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	TTLL11	Q8NHH1	800 aa		13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	GRAPL	Q8TC17	118 aa	Predicted RBP	13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	RCAN3	Q9UKA8	241 aa		13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	ABCC4	O15439	1325 aa		13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.85	□□□□□ -0.19
EDRF1-210	ENST00000525358	DLEC1	Q9Y238	1755 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	CTSW	P56202	376 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	GRIPAP1	Q4V328	841 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	CCDC93	Q567U6	631 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	INTS3	Q68E01	1043 aa	Known RBP	13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	TMC4	Q7Z404	712 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	RTKN2	Q8IZC4	609 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	UTY	O14607	1347 aa		13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	COL11A2	P13942	1736 aa	Predicted RBP	13.84	□□□□□ -0.19
EDRF1-210	ENST00000525358	CSF1R	P07333	972 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	TRIM27	P14373	513 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	RPS8	P62241	208 aa	Known RBP	13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	SP8	Q8IXZ3	490 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	USP44	Q9H0E7	712 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	HDAC5	Q9UQL6	1122 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	ATP6V0A2	Q9Y487	856 aa		13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.83	□□□□□ -0.2
EDRF1-210	ENST00000525358	BRCA1	P38398	1863 aa	Known RBP	13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	MS4A1	P11836	297 aa		13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	FOXO4	P98177	505 aa		13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	CELF1	Q92879	486 aa	Known RBP	13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	CLUAP1	Q96AJ1	413 aa		13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	SEC31B	Q9NQW1	1179 aa		13.82	□□□□□ -0.2
EDRF1-210	ENST00000525358	DDX60	Q8IY21	1712 aa	Known RBP	13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	ANKRD18A	Q8IVF6	992 aa		13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	DZIP1L	Q8IYY4	767 aa	Known RBP	13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	CDC5L	Q99459	802 aa	Known RBP	13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	GREM2	Q9H772	168 aa		13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	RTL9	Q8NET4	1388 aa		13.81	□□□□□ -0.2
EDRF1-210	ENST00000525358	ANKRD18B	A2A2Z9	1011 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	NFKBIE	O00221	500 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	LMBR1L	Q6UX01	489 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	OLFM4	Q6UX06	510 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	FTSJ3	Q8IY81	847 aa	Known RBP	13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	SUCLG2	Q96I99	432 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	TAOK3	Q9H2K8	898 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	TNN	Q9UQP3	1299 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	LTBP3	Q9NS15	1303 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	ARFGEF1	Q9Y6D6	1849 aa		13.8	□□□□□ -0.2
EDRF1-210	ENST00000525358	SLX4	Q8IY92	1834 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	GNAI3	P08754	354 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	UBTFL1	P0CB47	393 aa	Predicted RBP	13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	LMNB1	P20700	586 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	ITGA6	P23229	1130 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	YY1	P25490	414 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	IGHMBP2	P38935	993 aa	Known RBP	13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	RASSF7	Q02833	373 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	IFIT5	Q13325	482 aa	Known RBP	13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	CCDC57	Q2TAC2	916 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	EPHA10	Q5JZY3	1008 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	TMEM57	Q8N5G2	664 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	KAZALD1	Q96I82	304 aa		13.79	□□□□□ -0.2
EDRF1-210	ENST00000525358	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms