RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 GPC2Q8N158 579 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
SF3B2-204ENST00000525207 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
SF3B2-204ENST00000525207 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
SF3B2-204ENST00000525207 SPEF2Q9C093 1822 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 PPIP5K2O43314 1243 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 BBOX1O75936 387 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 AOC3Q16853 763 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 TMX4Q9H1E5 349 aaPredicted RBP12.19□□□□□ -0.46
SF3B2-204ENST00000525207 HACL1Q9UJ83 578 aa12.19□□□□□ -0.46
SF3B2-204ENST00000525207 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 EPHX2P34913 555 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
SF3B2-204ENST00000525207 SF3B3Q15393 1217 aaKnown RBP12.18□□□□□ -0.46
SF3B2-204ENST00000525207 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 SP8Q8IXZ3 490 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 MYD88Q99836 296 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
SF3B2-204ENST00000525207 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 DDX58O95786 925 aaKnown RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 SCNN1DP51172 638 aa12.17□□□□□ -0.46
SF3B2-204ENST00000525207 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
SF3B2-204ENST00000525207 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
SF3B2-204ENST00000525207 METTL22Q9BUU2 404 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-204ENST00000525207 PSME4Q14997 1843 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
SF3B2-204ENST00000525207 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
SF3B2-204ENST00000525207 MPNDQ8N594 471 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 CELF1Q92879 486 aaKnown RBP12.16□□□□□ -0.46
SF3B2-204ENST00000525207 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
SF3B2-204ENST00000525207 TRPM7Q96QT4 1865 aa12.15□□□□□ -0.46
SF3B2-204ENST00000525207 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-204ENST00000525207 CWC25Q9NXE8 425 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-204ENST00000525207 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
SF3B2-204ENST00000525207 SCN9AQ15858 1988 aa12.15□□□□□ -0.46
SF3B2-204ENST00000525207 CDHR2Q9BYE9 1310 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 HSP90B1P14625 803 aaKnown RBP12.14□□□□□ -0.47
SF3B2-204ENST00000525207 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-204ENST00000525207 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
SF3B2-204ENST00000525207 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 PDE8AO60658 829 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 CXCL9Q07325 125 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 G2E3Q7L622 706 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
SF3B2-204ENST00000525207 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-204ENST00000525207 YDJCA8MPS7 323 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-204ENST00000525207 EPS15P42566 896 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 FLIIQ13045 1269 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
SF3B2-204ENST00000525207 RTL9Q8NET4 1388 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 CTSWP56202 376 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
SF3B2-204ENST00000525207 GPSM2P81274 684 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
SF3B2-204ENST00000525207 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-204ENST00000525207 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
SF3B2-204ENST00000525207 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
SF3B2-204ENST00000525207 PCNTO95613 3336 aa12.11□□□□□ -0.47
SF3B2-204ENST00000525207 GMPSP49915 693 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 EXOSC9Q06265 439 aaKnown RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 USP50Q70EL3 339 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 ADARB2Q9NS39 739 aaKnown RBP12.1□□□□□ -0.47
SF3B2-204ENST00000525207 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 POLLQ9UGP5 575 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 ZNF609O15014 1411 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 ZNF521Q96K83 1311 aa12.1□□□□□ -0.47
SF3B2-204ENST00000525207 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms