RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 CLDN10P78369 228 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 KRT27Q7Z3Y8 459 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 ZNF784Q8NCA9 323 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 GLI3P10071 1580 aa7.7□□□□□ -1.18
CTNNA1-239ENST00000523685 FAM83GA6ND36 823 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 SMPD1P17405 629 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 NOVA2Q9UNW9 492 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 USP32Q8NFA0 1604 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 KIF1AQ12756 1690 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 ARHGEF10O15013 1369 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 FMN2Q9NZ56 1722 aa7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 MARF1Q9Y4F3 1742 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-239ENST00000523685 EP400Q96L91 3159 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 LILRA1O75019 489 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 FAM182BQ5T319 152 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 ANKMY2Q8IV38 441 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 FAM200AQ8TCP9 573 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 ZNF594Q96JF6 807 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 OSBPL3Q9H4L5 887 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 BTG4Q9NY30 223 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 SBNO1A3KN83 1393 aa7.68□□□□□ -1.18
CTNNA1-239ENST00000523685 KNDC1Q76NI1 1749 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 ADD1P35611 737 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 BAG6P46379 1132 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 DPYDQ12882 1025 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 NGDNQ8NEJ9 315 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 TRAIPQ9BWF2 469 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 KLF16Q9BXK1 252 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 ZMIZ1Q9ULJ6 1067 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 PDZRN3Q9UPQ7 1066 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 GPRASP1Q5JY77 1395 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 NRXN1Q9ULB1 1477 aa7.67□□□□□ -1.18
CTNNA1-239ENST00000523685 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 IFT172Q9UG01 1749 aa7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 ZIC2O95409 532 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 WDR4P57081 412 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 SIX5Q8N196 739 aa7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 KIAA1024Q9UPX6 916 aa7.66□□□□□ -1.18
CTNNA1-239ENST00000523685 RGPD8O14715 1765 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 DKK1O94907 266 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 SEC13P55735 322 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 TMEM164Q5U3C3 297 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 BRWD3Q6RI45 1802 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 DCAF11Q8TEB1 546 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 STK32AQ8WU08 396 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 PRDM11Q9NQV5 511 aa7.65□□□□□ -1.18
CTNNA1-239ENST00000523685 PLCH1Q4KWH8 1693 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 ANKARQ7Z5J8 1434 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 TMEM88BA6NKF7 163 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 R3HDM1Q15032 1099 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 HPS1Q92902 700 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 ZFAND3Q9H8U3 227 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 STRN4Q9NRL3 753 aa7.64□□□□□ -1.19
CTNNA1-239ENST00000523685 SPATA31A5Q5VU36 1347 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 SPATA31A7Q8IWB4 1347 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 GNRH1P01148 92 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 TIMP2P16035 220 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 ZC3H6P61129 1189 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 CBLBQ13191 982 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 Q6ZVU0 165 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 USP35Q9P2H5 1018 aa7.63□□□□□ -1.19
CTNNA1-239ENST00000523685 EIF3AQ14152 1382 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 RAB3GAP2Q9H2M9 1393 aa7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 NWD2Q9ULI1 1742 aa7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 SFI1A8K8P3 1242 aa7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 ADH1AP07327 375 aa7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 EZH2Q15910 746 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 DLC1Q96QB1 1528 aa7.62□□□□□ -1.19
CTNNA1-239ENST00000523685 ABCA3Q99758 1704 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 KIAA0232Q92628 1395 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 TMEM229AB2RXF0 380 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 M0R2N6 131 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 TRIM37O94972 964 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 INHAP05111 366 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 SCNN1DP51172 638 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 GDF10P55107 478 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 EVA1CP58658 441 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
CTNNA1-239ENST00000523685 NUDT16Q96DE0 195 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms