RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 HSP90AB3PQ58FF7 597 aa29.87■■■□□ 2.37
PVT1-218ENST00000523328 CIAPIN1Q6FI81 312 aa29.87■■■□□ 2.37
PVT1-218ENST00000523328 SAPCD2Q86UD0 394 aa29.87■■■□□ 2.37
PVT1-218ENST00000523328 CDHR2Q9BYE9 1310 aa29.87■■■□□ 2.37
PVT1-218ENST00000523328 AOC2O75106 756 aa29.86■■■□□ 2.37
PVT1-218ENST00000523328 MAP2K2P36507 400 aa29.86■■■□□ 2.37
PVT1-218ENST00000523328 XAGE3Q8WTP9 111 aa29.86■■■□□ 2.37
PVT1-218ENST00000523328 GLIS2Q9BZE0 524 aaPredicted RBP29.86■■■□□ 2.37
PVT1-218ENST00000523328 DUOX1Q9NRD9 1551 aa29.86■■■□□ 2.37
PVT1-218ENST00000523328 LRRC37AA6NMS7 1700 aa29.85■■■□□ 2.37
PVT1-218ENST00000523328 CELF2O95319 508 aaKnown RBP29.85■■■□□ 2.37
PVT1-218ENST00000523328 AIMP1Q12904 312 aaKnown RBP29.85■■■□□ 2.37
PVT1-218ENST00000523328 TCIRG1Q13488 830 aa29.85■■■□□ 2.37
PVT1-218ENST00000523328 NECTIN2Q92692 538 aa29.85■■■□□ 2.37
PVT1-218ENST00000523328 RAD17O75943 681 aa29.84■■■□□ 2.37
PVT1-218ENST00000523328 HIRAP54198 1017 aaPredicted RBP29.84■■■□□ 2.37
PVT1-218ENST00000523328 GRAPQ13588 217 aa29.84■■■□□ 2.37
PVT1-218ENST00000523328 GRAPLQ8TC17 118 aaPredicted RBP29.84■■■□□ 2.37
PVT1-218ENST00000523328 TRMT112Q9UI30 125 aaKnown RBP29.84■■■□□ 2.37
PVT1-218ENST00000523328 DDX60Q8IY21 1712 aaKnown RBP29.83■■■□□ 2.37
PVT1-218ENST00000523328 SH3TC1Q8TE82 1336 aa29.83■■■□□ 2.37
PVT1-218ENST00000523328 TMPOP42166 694 aaKnown RBP29.83■■■□□ 2.37
PVT1-218ENST00000523328 DDX46Q7L014 1031 aaKnown RBP29.83■■■□□ 2.37
PVT1-218ENST00000523328 HHIPL1Q96JK4 782 aa29.83■■■□□ 2.37
PVT1-218ENST00000523328 YDJCA8MPS7 323 aa29.82■■■□□ 2.36
PVT1-218ENST00000523328 ZC3H15Q8WU90 426 aaKnown RBP29.82■■■□□ 2.36
PVT1-218ENST00000523328 BCL2L13Q9BXK5 485 aa29.82■■■□□ 2.36
PVT1-218ENST00000523328 TSKSQ9UJT2 592 aa29.82■■■□□ 2.36
PVT1-218ENST00000523328 TNIP1Q15025 636 aa29.81■■■□□ 2.36
PVT1-218ENST00000523328 TRPM4Q8TD43 1214 aa29.81■■■□□ 2.36
PVT1-218ENST00000523328 SHTN1A0MZ66 631 aa29.79■■■□□ 2.36
PVT1-218ENST00000523328 LMOD3Q0VAK6 560 aa29.79■■■□□ 2.36
PVT1-218ENST00000523328 KRT24Q2M2I5 525 aa29.79■■■□□ 2.36
PVT1-218ENST00000523328 FAM161AQ3B820 660 aa29.79■■■□□ 2.36
PVT1-218ENST00000523328 CASP8AP2Q9UKL3 1982 aa29.78■■■□□ 2.36
PVT1-218ENST00000523328 TMC4Q7Z404 712 aa29.78■■■□□ 2.36
PVT1-218ENST00000523328 CNOT7Q9UIV1 285 aaKnown RBP29.78■■■□□ 2.36
PVT1-218ENST00000523328 CDC37L1Q7L3B6 337 aa29.77■■■□□ 2.36
PVT1-218ENST00000523328 ZNF428Q96B54 188 aa29.76■■■□□ 2.35
PVT1-218ENST00000523328 ZNF408Q9H9D4 720 aa29.76■■■□□ 2.35
PVT1-218ENST00000523328 CHL1O00533 1208 aa29.75■■■□□ 2.35
PVT1-218ENST00000523328 CA12O43570 354 aa29.75■■■□□ 2.35
PVT1-218ENST00000523328 BRPF1P55201 1214 aaPredicted RBP29.75■■■□□ 2.35
PVT1-218ENST00000523328 MICALL2Q8IY33 904 aa29.75■■■□□ 2.35
PVT1-218ENST00000523328 CHPF2Q9P2E5 772 aa29.75■■■□□ 2.35
PVT1-218ENST00000523328 POLR2AP24928 1970 aaKnown RBP29.75■■■□□ 2.35
PVT1-218ENST00000523328 COL4A1P02462 1669 aa29.75■■■□□ 2.35
PVT1-218ENST00000523328 CCDC85CA6NKD9 419 aa29.73■■■□□ 2.35
PVT1-218ENST00000523328 H7C1D1 291 aa29.73■■■□□ 2.35
PVT1-218ENST00000523328 DPF2Q92785 391 aa29.73■■■□□ 2.35
PVT1-218ENST00000523328 ZBTB12Q9Y330 459 aaPredicted RBP29.73■■■□□ 2.35
PVT1-218ENST00000523328 PLBD2Q8NHP8 589 aa29.72■■■□□ 2.35
PVT1-218ENST00000523328 CELF1Q92879 486 aaKnown RBP29.72■■■□□ 2.35
PVT1-218ENST00000523328 ISCA1Q9BUE6 129 aa29.72■■■□□ 2.35
PVT1-218ENST00000523328 PSMD14O00487 310 aa29.71■■■□□ 2.35
PVT1-218ENST00000523328 RGS19P49795 217 aa29.71■■■□□ 2.35
PVT1-218ENST00000523328 RALBP1Q15311 655 aa29.71■■■□□ 2.35
PVT1-218ENST00000523328 SF3B3Q15393 1217 aaKnown RBP29.71■■■□□ 2.35
PVT1-218ENST00000523328 WASHC4Q2M389 1173 aa29.71■■■□□ 2.35
PVT1-218ENST00000523328 NEUROD2Q15784 382 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 DLK2Q6UY11 383 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 SAMD7Q7Z3H4 446 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 USP48Q86UV5 1035 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 FAM89AQ96GI7 184 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 DBNDD1Q9H9R9 158 aa29.7■■■□□ 2.35
PVT1-218ENST00000523328 NSFL1CQ9UNZ2 370 aaKnown RBP29.7■■■□□ 2.35
PVT1-218ENST00000523328 ANKRD13DQ6ZTN6 518 aa29.69■■■□□ 2.34
PVT1-218ENST00000523328 CCDC146Q8IYE0 955 aa29.69■■■□□ 2.34
PVT1-218ENST00000523328 ZIC5Q96T25 663 aa29.69■■■□□ 2.34
PVT1-218ENST00000523328 POLLQ9UGP5 575 aa29.69■■■□□ 2.34
PVT1-218ENST00000523328 TRIM35Q9UPQ4 493 aa29.69■■■□□ 2.34
PVT1-218ENST00000523328 HDGFL1Q5TGJ6 251 aa29.68■■■□□ 2.34
PVT1-218ENST00000523328 MCOLN1Q9GZU1 580 aa29.68■■■□□ 2.34
PVT1-218ENST00000523328 ATP5J2-PTCD1G3V325 749 aa29.67■■■□□ 2.34
PVT1-218ENST00000523328 EGFRP00533 1210 aa29.67■■■□□ 2.34
PVT1-218ENST00000523328 HOXB7P09629 217 aa29.67■■■□□ 2.34
PVT1-218ENST00000523328 NOGQ13253 232 aa29.67■■■□□ 2.34
PVT1-218ENST00000523328 LAS1LQ9Y4W2 734 aaKnown RBP29.67■■■□□ 2.34
PVT1-218ENST00000523328 SCN9AQ15858 1988 aa29.66■■■□□ 2.34
PVT1-218ENST00000523328 RIMBP2O15034 1052 aa29.66■■■□□ 2.34
PVT1-218ENST00000523328 HUNKP57058 714 aa29.66■■■□□ 2.34
PVT1-218ENST00000523328 GPSM2P81274 684 aa29.66■■■□□ 2.34
PVT1-218ENST00000523328 MLLT1Q03111 559 aaPredicted RBP29.66■■■□□ 2.34
PVT1-218ENST00000523328 DBF4Q9UBU7 674 aaPredicted RBP29.66■■■□□ 2.34
PVT1-218ENST00000523328 RTL9Q8NET4 1388 aa29.65■■■□□ 2.34
PVT1-218ENST00000523328 TBC1D10BQ4KMP7 808 aaPredicted RBP29.65■■■□□ 2.34
PVT1-218ENST00000523328 KCNQ5Q9NR82 932 aa29.65■■■□□ 2.34
PVT1-218ENST00000523328 C6orf229H3BNL8 230 aa29.64■■■□□ 2.34
PVT1-218ENST00000523328 RPS12P25398 132 aaKnown RBP29.64■■■□□ 2.34
PVT1-218ENST00000523328 KRT26Q7Z3Y9 468 aa29.64■■■□□ 2.34
PVT1-218ENST00000523328 ECE2O60344 883 aa29.63■■■□□ 2.33
PVT1-218ENST00000523328 SLC34A2O95436 690 aa29.62■■■□□ 2.33
PVT1-218ENST00000523328 TRIM28Q13263 835 aaKnown RBP29.62■■■□□ 2.33
PVT1-218ENST00000523328 RTL5Q5HYW3 569 aaPredicted RBP29.62■■■□□ 2.33
PVT1-218ENST00000523328 FAM155AB1AL88 458 aaPredicted RBP29.61■■■□□ 2.33
PVT1-218ENST00000523328 DOK7Q18PE1 504 aa29.61■■■□□ 2.33
PVT1-218ENST00000523328 TBC1D16Q8TBP0 767 aa29.61■■■□□ 2.33
PVT1-218ENST00000523328 RUNDC1Q96C34 613 aa29.61■■■□□ 2.33
PVT1-218ENST00000523328 EYA3Q99504 573 aa29.61■■■□□ 2.33
PVT1-218ENST00000523328 GBA2Q9HCG7 927 aaPredicted RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms