RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 TFCP2Q12800 502 aa33.46■■■□□ 2.95
TRNP1-201ENST00000522111 IFIT2P09913 472 aaKnown RBP33.45■■■□□ 2.94
TRNP1-201ENST00000522111 ITGA6P23229 1130 aa33.45■■■□□ 2.94
TRNP1-201ENST00000522111 LRRC24Q50LG9 513 aa33.45■■■□□ 2.94
TRNP1-201ENST00000522111 TAF7LQ5H9L4 462 aa33.45■■■□□ 2.94
TRNP1-201ENST00000522111 SETDB2Q96T68 719 aa33.45■■■□□ 2.94
TRNP1-201ENST00000522111 RGL2O15211 777 aa33.44■■■□□ 2.94
TRNP1-201ENST00000522111 ADRA2BP18089 450 aa33.44■■■□□ 2.94
TRNP1-201ENST00000522111 EAF2Q96CJ1 260 aaPredicted RBP33.44■■■□□ 2.94
TRNP1-201ENST00000522111 STAP2Q9UGK3 403 aa33.44■■■□□ 2.94
TRNP1-201ENST00000522111 ATG9AQ7Z3C6 839 aa33.43■■■□□ 2.94
TRNP1-201ENST00000522111 PUS3Q9BZE2 481 aaKnown RBP33.43■■■□□ 2.94
TRNP1-201ENST00000522111 SDSP20132 328 aa33.43■■■□□ 2.94
TRNP1-201ENST00000522111 ERFEQ4G0M1 354 aa33.43■■■□□ 2.94
TRNP1-201ENST00000522111 CCDC8Q9H0W5 538 aaPredicted RBP33.43■■■□□ 2.94
TRNP1-201ENST00000522111 TLR7Q9NYK1 1049 aaKnown RBP33.42■■■□□ 2.94
TRNP1-201ENST00000522111 LAMB2P55268 1798 aa33.42■■■□□ 2.94
TRNP1-201ENST00000522111 EYA2O00167 538 aa33.41■■■□□ 2.94
TRNP1-201ENST00000522111 ZNF827Q17R98 1081 aa33.41■■■□□ 2.94
TRNP1-201ENST00000522111 SSFA2P28290 1259 aa33.41■■■□□ 2.94
TRNP1-201ENST00000522111 GTF2E1P29083 439 aaPredicted RBP33.41■■■□□ 2.94
TRNP1-201ENST00000522111 COL24A1Q17RW2 1714 aa33.4■■■□□ 2.94
TRNP1-201ENST00000522111 ANKRD18BA2A2Z9 1011 aa33.4■■■□□ 2.94
TRNP1-201ENST00000522111 TFCP2L1Q9NZI6 479 aa33.4■■■□□ 2.94
TRNP1-201ENST00000522111 TUBGCP6Q96RT7 1819 aa33.39■■■□□ 2.94
TRNP1-201ENST00000522111 IL15P40933 162 aaPredicted RBP33.39■■■□□ 2.94
TRNP1-201ENST00000522111 NBPF5PQ86XG9 351 aaPredicted RBP33.39■■■□□ 2.94
TRNP1-201ENST00000522111 PI4K2BQ8TCG2 481 aa33.38■■■□□ 2.93
TRNP1-201ENST00000522111 TNNI3KQ59H18 835 aa33.38■■■□□ 2.93
TRNP1-201ENST00000522111 TBC1D9Q6ZT07 1266 aa33.38■■■□□ 2.93
TRNP1-201ENST00000522111 FPGT-TNNI3KV9GXZ4 949 aa33.38■■■□□ 2.93
TRNP1-201ENST00000522111 AOX1Q06278 1338 aa33.37■■■□□ 2.93
TRNP1-201ENST00000522111 CCDC24Q8N4L8 307 aa33.37■■■□□ 2.93
TRNP1-201ENST00000522111 TRIM6-TRIM34B2RNG4 842 aa33.36■■■□□ 2.93
TRNP1-201ENST00000522111 CIAO1O76071 339 aa33.36■■■□□ 2.93
TRNP1-201ENST00000522111 ABCC12Q96J65 1359 aa33.36■■■□□ 2.93
TRNP1-201ENST00000522111 CDC45O75419 566 aa33.36■■■□□ 2.93
TRNP1-201ENST00000522111 MAP4K4O95819 1239 aaPredicted RBP33.36■■■□□ 2.93
TRNP1-201ENST00000522111 HSP90B1P14625 803 aaKnown RBP33.35■■■□□ 2.93
TRNP1-201ENST00000522111 GPATCH3Q96I76 525 aa33.35■■■□□ 2.93
TRNP1-201ENST00000522111 NYXQ9GZU5 481 aa33.35■■■□□ 2.93
TRNP1-201ENST00000522111 GYS1P13807 737 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 MFAP1P55081 439 aaKnown RBP33.34■■■□□ 2.93
TRNP1-201ENST00000522111 NFIXQ14938 502 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 LDHAL6AQ6ZMR3 332 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 RILPL2Q969X0 211 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 ECHDC1Q9NTX5 307 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 CASZ1Q86V15 1759 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 TTC41PQ6P2S7 1318 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 NPHP1O15259 732 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 CCDC152Q4G0S7 254 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 C3orf67Q6ZVT6 689 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 SEC31BQ9NQW1 1179 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 RGPD3A6NKT7 1758 aaPredicted RBP33.34■■■□□ 2.93
TRNP1-201ENST00000522111 RGPD4Q7Z3J3 1758 aa33.34■■■□□ 2.93
TRNP1-201ENST00000522111 EN1Q05925 392 aaPredicted RBP33.33■■■□□ 2.93
TRNP1-201ENST00000522111 AKT1S1Q96B36 256 aa33.33■■■□□ 2.93
TRNP1-201ENST00000522111 HMGB2P26583 209 aaKnown RBP33.32■■■□□ 2.93
TRNP1-201ENST00000522111 CNNM1Q9NRU3 951 aa33.32■■■□□ 2.93
TRNP1-201ENST00000522111 DBNLQ9UJU6 430 aaKnown RBP33.32■■■□□ 2.93
TRNP1-201ENST00000522111 CARMIL3Q8ND23 1372 aa33.32■■■□□ 2.92
TRNP1-201ENST00000522111 MSH5O43196 834 aa33.31■■■□□ 2.92
TRNP1-201ENST00000522111 EZH2Q15910 746 aaKnown RBP33.31■■■□□ 2.92
TRNP1-201ENST00000522111 TPTE2Q6XPS3 522 aa33.31■■■□□ 2.92
TRNP1-201ENST00000522111 CEP126Q9P2H0 1117 aa33.3■■■□□ 2.92
TRNP1-201ENST00000522111 ERC2O15083 957 aa33.3■■■□□ 2.92
TRNP1-201ENST00000522111 GLRX3O76003 335 aaKnown RBP33.3■■■□□ 2.92
TRNP1-201ENST00000522111 NEUROD6Q96NK8 337 aa33.3■■■□□ 2.92
TRNP1-201ENST00000522111 FBXO3Q9UK99 471 aa33.3■■■□□ 2.92
TRNP1-201ENST00000522111 SPEF2Q9C093 1822 aa33.29■■■□□ 2.92
TRNP1-201ENST00000522111 DBNDD2Q9BQY9 259 aa33.29■■■□□ 2.92
TRNP1-201ENST00000522111 RIC1Q4ADV7 1423 aa33.29■■■□□ 2.92
TRNP1-201ENST00000522111 TIMM10P62072 90 aa33.29■■■□□ 2.92
TRNP1-201ENST00000522111 UPF2Q9HAU5 1272 aaKnown RBP33.29■■■□□ 2.92
TRNP1-201ENST00000522111 AK9Q5TCS8 1911 aa33.28■■■□□ 2.92
TRNP1-201ENST00000522111 ZNF609O15014 1411 aa33.28■■■□□ 2.92
TRNP1-201ENST00000522111 METTL24Q5JXM2 366 aa33.27■■■□□ 2.92
TRNP1-201ENST00000522111 RIPOR2Q9Y4F9 1068 aa33.27■■■□□ 2.92
TRNP1-201ENST00000522111 LRP5O75197 1615 aa33.26■■■□□ 2.92
TRNP1-201ENST00000522111 COL23A1Q86Y22 540 aaPredicted RBP33.26■■■□□ 2.91
TRNP1-201ENST00000522111 COL4A1P02462 1669 aa33.26■■■□□ 2.91
TRNP1-201ENST00000522111 ANP32AP39687 249 aaKnown RBP33.25■■■□□ 2.91
TRNP1-201ENST00000522111 SLC10A5Q5PT55 438 aa33.25■■■□□ 2.91
TRNP1-201ENST00000522111 CAMKK2Q96RR4 588 aa33.25■■■□□ 2.91
TRNP1-201ENST00000522111 A0A1B0GUL7 405 aa33.25■■■□□ 2.91
TRNP1-201ENST00000522111 CNBD1Q8NA66 436 aa33.25■■■□□ 2.91
TRNP1-201ENST00000522111 GPR108Q9NPR9 543 aa33.25■■■□□ 2.91
TRNP1-201ENST00000522111 TAF1P21675 1872 aa33.24■■■□□ 2.91
TRNP1-201ENST00000522111 RTL9Q8NET4 1388 aa33.24■■■□□ 2.91
TRNP1-201ENST00000522111 MPHOSPH8Q99549 860 aa33.24■■■□□ 2.91
TRNP1-201ENST00000522111 CASC1Q6TDU7 716 aa33.23■■■□□ 2.91
TRNP1-201ENST00000522111 BOLA2Q9H3K6 86 aa33.23■■■□□ 2.91
TRNP1-201ENST00000522111 NLRP3Q96P20 1036 aa33.23■■■□□ 2.91
TRNP1-201ENST00000522111 TNRC6CQ9HCJ0 1690 aaKnown RBP33.22■■■□□ 2.91
TRNP1-201ENST00000522111 SF3B2Q13435 895 aaKnown RBP33.22■■■□□ 2.91
TRNP1-201ENST00000522111 SF3B3Q15393 1217 aaKnown RBP33.22■■■□□ 2.91
TRNP1-201ENST00000522111 ILDR1Q86SU0 546 aaPredicted RBP33.21■■■□□ 2.91
TRNP1-201ENST00000522111 CNTROBQ8N137 903 aa33.21■■■□□ 2.91
TRNP1-201ENST00000522111 ANO8Q9HCE9 1232 aaPredicted RBP33.21■■■□□ 2.91
TRNP1-201ENST00000522111 IGHMBP2P38935 993 aaKnown RBP33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms