RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 NEUROD2Q15784 382 aa19.43■□□□□ 0.7
PRKDC-204ENST00000521331 CIAPIN1Q6FI81 312 aa19.43■□□□□ 0.7
PRKDC-204ENST00000521331 TRAF5O00463 557 aa19.42■□□□□ 0.7
PRKDC-204ENST00000521331 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
PRKDC-204ENST00000521331 GMPSP49915 693 aaPredicted RBP19.42■□□□□ 0.7
PRKDC-204ENST00000521331 FMR1Q06787 632 aaKnown RBP eCLIP19.42■□□□□ 0.73e-7■■■■■ 38.6
PRKDC-204ENST00000521331 PAXIP1Q6ZW49 1069 aaPredicted RBP19.42■□□□□ 0.7
PRKDC-204ENST00000521331 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
PRKDC-204ENST00000521331 CAPNS2Q96L46 248 aa19.42■□□□□ 0.7
PRKDC-204ENST00000521331 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
PRKDC-204ENST00000521331 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 CST9Q5W186 159 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
PRKDC-204ENST00000521331 TLL2Q9Y6L7 1015 aa19.41■□□□□ 0.7
PRKDC-204ENST00000521331 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.7
PRKDC-204ENST00000521331 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
PRKDC-204ENST00000521331 BEGAINQ9BUH8 593 aa19.4■□□□□ 0.7
PRKDC-204ENST00000521331 TRIM35Q9UPQ4 493 aa19.4■□□□□ 0.7
PRKDC-204ENST00000521331 RAD17O75943 681 aa19.39■□□□□ 0.69
PRKDC-204ENST00000521331 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
PRKDC-204ENST00000521331 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.69
PRKDC-204ENST00000521331 GPR101Q96P66 508 aaPredicted RBP19.39■□□□□ 0.69
PRKDC-204ENST00000521331 DBF4Q9UBU7 674 aaPredicted RBP19.39■□□□□ 0.69
PRKDC-204ENST00000521331 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
PRKDC-204ENST00000521331 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
PRKDC-204ENST00000521331 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
PRKDC-204ENST00000521331 CELF2O95319 508 aaKnown RBP19.37■□□□□ 0.69
PRKDC-204ENST00000521331 MAP2K2P36507 400 aa19.37■□□□□ 0.69
PRKDC-204ENST00000521331 GRM1Q13255 1194 aa19.37■□□□□ 0.69
PRKDC-204ENST00000521331 SF3B3Q15393 1217 aaKnown RBP19.37■□□□□ 0.69
PRKDC-204ENST00000521331 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
PRKDC-204ENST00000521331 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 H7C1D1 291 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
PRKDC-204ENST00000521331 SAPCD2Q86UD0 394 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 HHIPL1Q96JK4 782 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
PRKDC-204ENST00000521331 GLIS2Q9BZE0 524 aaPredicted RBP19.36■□□□□ 0.69
PRKDC-204ENST00000521331 CNOT7Q9UIV1 285 aaKnown RBP19.36■□□□□ 0.69
PRKDC-204ENST00000521331 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
PRKDC-204ENST00000521331 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
PRKDC-204ENST00000521331 WASHC4Q2M389 1173 aa19.35■□□□□ 0.69
PRKDC-204ENST00000521331 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
PRKDC-204ENST00000521331 LAMB2P55268 1798 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
PRKDC-204ENST00000521331 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 TRPM4Q8TD43 1214 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 DPF2Q92785 391 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
PRKDC-204ENST00000521331 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 DUOX1Q9NRD9 1551 aa19.34■□□□□ 0.69
PRKDC-204ENST00000521331 MICALL2Q8IY33 904 aa19.33■□□□□ 0.68
PRKDC-204ENST00000521331 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.68
PRKDC-204ENST00000521331 ZNF428Q96B54 188 aa19.33■□□□□ 0.68
PRKDC-204ENST00000521331 CA12O43570 354 aa19.32■□□□□ 0.68
PRKDC-204ENST00000521331 HSP90B1P14625 803 aaKnown RBP19.32■□□□□ 0.68
PRKDC-204ENST00000521331 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
PRKDC-204ENST00000521331 EYA3Q99504 573 aa19.32■□□□□ 0.68
PRKDC-204ENST00000521331 TRPM7Q96QT4 1865 aa19.32■□□□□ 0.68
PRKDC-204ENST00000521331 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 PSMD14O00487 310 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
PRKDC-204ENST00000521331 AOC2O75106 756 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
PRKDC-204ENST00000521331 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 ZNF408Q9H9D4 720 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 MBIPQ9NS73 344 aa19.31■□□□□ 0.68
PRKDC-204ENST00000521331 RPS8P62241 208 aaKnown RBP19.3■□□□□ 0.68
PRKDC-204ENST00000521331 GPSM2P81274 684 aa19.3■□□□□ 0.68
PRKDC-204ENST00000521331 RTL5Q5HYW3 569 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-204ENST00000521331 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
PRKDC-204ENST00000521331 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-204ENST00000521331 POLLQ9UGP5 575 aa19.3■□□□□ 0.68
PRKDC-204ENST00000521331 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-204ENST00000521331 SHTN1A0MZ66 631 aa19.29■□□□□ 0.68
PRKDC-204ENST00000521331 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
PRKDC-204ENST00000521331 ECE2O60344 883 aa19.29■□□□□ 0.68
PRKDC-204ENST00000521331 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
PRKDC-204ENST00000521331 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
PRKDC-204ENST00000521331 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
PRKDC-204ENST00000521331 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
PRKDC-204ENST00000521331 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
PRKDC-204ENST00000521331 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
PRKDC-204ENST00000521331 GNAI1P63096 354 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 NOGQ13253 232 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 SAMD7Q7Z3H4 446 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
PRKDC-204ENST00000521331 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
PRKDC-204ENST00000521331 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
PRKDC-204ENST00000521331 TBC1D10BQ4KMP7 808 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms