RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CCDC152Q4G0S7 254 aa20.67■□□□□ 0.9
TNPO1-212ENST00000520850 C9orf131Q5VYM1 1079 aa20.67■□□□□ 0.9
TNPO1-212ENST00000520850 SMC4Q9NTJ3 1288 aa20.67■□□□□ 0.9
TNPO1-212ENST00000520850 SNED1Q8TER0 1413 aa20.67■□□□□ 0.9
TNPO1-212ENST00000520850 PPEF1O14829 653 aaPredicted RBP20.66■□□□□ 0.9
TNPO1-212ENST00000520850 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
TNPO1-212ENST00000520850 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
TNPO1-212ENST00000520850 ZNF784Q8NCA9 323 aaPredicted RBP20.66■□□□□ 0.9
TNPO1-212ENST00000520850 SRCIN1Q9C0H9 1055 aa20.66■□□□□ 0.9
TNPO1-212ENST00000520850 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
TNPO1-212ENST00000520850 VPS33BQ9H267 617 aa20.66■□□□□ 0.9
TNPO1-212ENST00000520850 RTL9Q8NET4 1388 aa20.65■□□□□ 0.9
TNPO1-212ENST00000520850 CSF1RP07333 972 aa20.64■□□□□ 0.89
TNPO1-212ENST00000520850 UBE3BQ7Z3V4 1068 aa20.64■□□□□ 0.89
TNPO1-212ENST00000520850 TTLL11Q8NHH1 800 aa20.64■□□□□ 0.89
TNPO1-212ENST00000520850 ZNF219Q9P2Y4 722 aaPredicted RBP20.64■□□□□ 0.89
TNPO1-212ENST00000520850 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
TNPO1-212ENST00000520850 UTYO14607 1347 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 GRM8O00222 908 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 PRELPP51888 382 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 CTSWP56202 376 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
TNPO1-212ENST00000520850 RASSF7Q02833 373 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
TNPO1-212ENST00000520850 RNF181Q9P0P0 153 aa20.63■□□□□ 0.89
TNPO1-212ENST00000520850 KIF16BQ96L93 1317 aa20.62■□□□□ 0.89
TNPO1-212ENST00000520850 API5Q9BZZ5 524 aaKnown RBP20.62■□□□□ 0.89
TNPO1-212ENST00000520850 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
TNPO1-212ENST00000520850 JARID2Q92833 1246 aaPredicted RBP20.61■□□□□ 0.89
TNPO1-212ENST00000520850 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
TNPO1-212ENST00000520850 BCL2L13Q9BXK5 485 aa20.61■□□□□ 0.89
TNPO1-212ENST00000520850 NOB1Q9ULX3 412 aaKnown RBP20.61■□□□□ 0.89
TNPO1-212ENST00000520850 DICER1Q9UPY3 1922 aaKnown RBP20.61■□□□□ 0.89
TNPO1-212ENST00000520850 IPO8O15397 1037 aaKnown RBP20.6■□□□□ 0.89
TNPO1-212ENST00000520850 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
TNPO1-212ENST00000520850 SUPT20HQ8NEM7 779 aa20.6■□□□□ 0.89
TNPO1-212ENST00000520850 C9orf78Q9NZ63 289 aaPredicted RBP20.6■□□□□ 0.89
TNPO1-212ENST00000520850 MYH3P11055 1940 aa20.59■□□□□ 0.89
TNPO1-212ENST00000520850 CCT4P50991 539 aaKnown RBP20.59■□□□□ 0.89
TNPO1-212ENST00000520850 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
TNPO1-212ENST00000520850 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.89
TNPO1-212ENST00000520850 MPNDQ8N594 471 aa20.58■□□□□ 0.89
TNPO1-212ENST00000520850 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.89
TNPO1-212ENST00000520850 IARSP41252 1262 aaKnown RBP20.57■□□□□ 0.88
TNPO1-212ENST00000520850 FOXO4P98177 505 aa20.57■□□□□ 0.88
TNPO1-212ENST00000520850 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
TNPO1-212ENST00000520850 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
TNPO1-212ENST00000520850 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 GLTPD2A6NH11 291 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 DPY19L2Q6NUT2 758 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 USP44Q9H0E7 712 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 GREM2Q9H772 168 aa20.56■□□□□ 0.88
TNPO1-212ENST00000520850 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
TNPO1-212ENST00000520850 DPP8Q6V1X1 898 aaPredicted RBP20.55■□□□□ 0.88
TNPO1-212ENST00000520850 GPBP1L1Q9HC44 474 aaPredicted RBP20.55■□□□□ 0.88
TNPO1-212ENST00000520850 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
TNPO1-212ENST00000520850 TAF1P21675 1872 aa20.55■□□□□ 0.88
TNPO1-212ENST00000520850 FZD9O00144 591 aa20.54■□□□□ 0.88
TNPO1-212ENST00000520850 BCAR3O75815 825 aa20.54■□□□□ 0.88
TNPO1-212ENST00000520850 NBPF7P0C2Y1 421 aaPredicted RBP20.54■□□□□ 0.88
TNPO1-212ENST00000520850 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
TNPO1-212ENST00000520850 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
TNPO1-212ENST00000520850 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
TNPO1-212ENST00000520850 HDAC5Q9UQL6 1122 aa20.54■□□□□ 0.88
TNPO1-212ENST00000520850 ITGA6P23229 1130 aa20.53■□□□□ 0.88
TNPO1-212ENST00000520850 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
TNPO1-212ENST00000520850 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.88
TNPO1-212ENST00000520850 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
TNPO1-212ENST00000520850 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
TNPO1-212ENST00000520850 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
TNPO1-212ENST00000520850 IGHMBP2P38935 993 aaKnown RBP20.51■□□□□ 0.87
TNPO1-212ENST00000520850 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
TNPO1-212ENST00000520850 IFIT5Q13325 482 aaKnown RBP20.51■□□□□ 0.87
TNPO1-212ENST00000520850 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
TNPO1-212ENST00000520850 CCDC85AQ96PX6 553 aaPredicted RBP20.51■□□□□ 0.87
TNPO1-212ENST00000520850 TRIM27P14373 513 aa20.5■□□□□ 0.87
TNPO1-212ENST00000520850 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
TNPO1-212ENST00000520850 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
TNPO1-212ENST00000520850 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
TNPO1-212ENST00000520850 COL4A1P02462 1669 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 GPSM2P81274 684 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 LARGE2Q8N3Y3 721 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 TBC1D16Q8TBP0 767 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 SUCLG2Q96I99 432 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 EYA3Q99504 573 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 XDHP47989 1333 aa20.49■□□□□ 0.87
TNPO1-212ENST00000520850 TIAM2Q8IVF5 1701 aa20.48■□□□□ 0.87
TNPO1-212ENST00000520850 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
TNPO1-212ENST00000520850 SLC51AQ86UW1 340 aa20.48■□□□□ 0.87
TNPO1-212ENST00000520850 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
TNPO1-212ENST00000520850 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
TNPO1-212ENST00000520850 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
TNPO1-212ENST00000520850 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
TNPO1-212ENST00000520850 L3MBTL3Q96JM7 780 aaPredicted RBP20.47■□□□□ 0.87
TNPO1-212ENST00000520850 ANKRD2Q9GZV1 360 aa20.47■□□□□ 0.87
TNPO1-212ENST00000520850 ANKIB1Q9P2G1 1089 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms