RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 MPNDQ8N594 471 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 ISCA1Q9BUE6 129 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 IFT57Q9NWB7 429 aa19.69■□□□□ 0.74
CSMD1-207ENST00000520451 CALD1Q05682 793 aaKnown RBP19.68■□□□□ 0.74
CSMD1-207ENST00000520451 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
CSMD1-207ENST00000520451 ZNRF3Q9ULT6 936 aa19.68■□□□□ 0.74
CSMD1-207ENST00000520451 GNAI1P63096 354 aa19.67■□□□□ 0.74
CSMD1-207ENST00000520451 CXCL9Q07325 125 aa19.66■□□□□ 0.74
CSMD1-207ENST00000520451 KIAA2012Q0VF49 1180 aa19.66■□□□□ 0.74
CSMD1-207ENST00000520451 TMC4Q7Z404 712 aa19.66■□□□□ 0.74
CSMD1-207ENST00000520451 DDX60Q8IY21 1712 aaKnown RBP19.65■□□□□ 0.74
CSMD1-207ENST00000520451 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
CSMD1-207ENST00000520451 GOLGA2Q08379 1002 aa19.65■□□□□ 0.74
CSMD1-207ENST00000520451 RTL5Q5HYW3 569 aaPredicted RBP19.65■□□□□ 0.74
CSMD1-207ENST00000520451 USP50Q70EL3 339 aaPredicted RBP19.65■□□□□ 0.74
CSMD1-207ENST00000520451 RIC3Q7Z5B4 369 aa19.65■□□□□ 0.74
CSMD1-207ENST00000520451 TNS4Q8IZW8 715 aa19.65■□□□□ 0.74
CSMD1-207ENST00000520451 VEGFBP49765 207 aa19.64■□□□□ 0.73
CSMD1-207ENST00000520451 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
CSMD1-207ENST00000520451 SF3B3Q15393 1217 aaKnown RBP19.64■□□□□ 0.73
CSMD1-207ENST00000520451 PHAXQ9H814 394 aaKnown RBP19.64■□□□□ 0.73
CSMD1-207ENST00000520451 GPRC5DQ9NZD1 345 aa19.64■□□□□ 0.73
CSMD1-207ENST00000520451 GMPSP49915 693 aaPredicted RBP19.63■□□□□ 0.73
CSMD1-207ENST00000520451 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
CSMD1-207ENST00000520451 CELF1Q92879 486 aaKnown RBP19.63■□□□□ 0.73
CSMD1-207ENST00000520451 ADARB2Q9NS39 739 aaKnown RBP19.63■□□□□ 0.73
CSMD1-207ENST00000520451 TAF1P21675 1872 aa19.62■□□□□ 0.73
CSMD1-207ENST00000520451 DUOX1Q9NRD9 1551 aa19.62■□□□□ 0.73
CSMD1-207ENST00000520451 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
CSMD1-207ENST00000520451 RAD17O75943 681 aa19.62■□□□□ 0.73
CSMD1-207ENST00000520451 C8orf58Q8NAV2 365 aa19.62■□□□□ 0.73
CSMD1-207ENST00000520451 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
CSMD1-207ENST00000520451 RASSF10A6NK89 507 aa19.61■□□□□ 0.73
CSMD1-207ENST00000520451 TNIP1Q15025 636 aa19.61■□□□□ 0.73
CSMD1-207ENST00000520451 DEFB115Q30KQ5 88 aa19.61■□□□□ 0.73
CSMD1-207ENST00000520451 MYD88Q99836 296 aa19.61■□□□□ 0.73
CSMD1-207ENST00000520451 LRRC37AA6NMS7 1700 aa19.61■□□□□ 0.73
CSMD1-207ENST00000520451 FMR1Q06787 632 aaKnown RBP eCLIP19.6■□□□□ 0.73
CSMD1-207ENST00000520451 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
CSMD1-207ENST00000520451 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
CSMD1-207ENST00000520451 NSFL1CQ9UNZ2 370 aaKnown RBP19.6■□□□□ 0.73
CSMD1-207ENST00000520451 CDHR2Q9BYE9 1310 aa19.59■□□□□ 0.73
CSMD1-207ENST00000520451 FOXN1O15353 648 aa19.59■□□□□ 0.73
CSMD1-207ENST00000520451 COL4A1P02462 1669 aa19.59■□□□□ 0.73
CSMD1-207ENST00000520451 YDJCA8MPS7 323 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 TRAF5O00463 557 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 CAPN15O75808 1086 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
CSMD1-207ENST00000520451 GPSM2P81274 684 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 WASHC4Q2M389 1173 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 AIDAQ96BJ3 306 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 CHMP4AQ9BY43 222 aa19.58■□□□□ 0.72
CSMD1-207ENST00000520451 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
CSMD1-207ENST00000520451 DDX58O95786 925 aaKnown RBP19.57■□□□□ 0.72
CSMD1-207ENST00000520451 RPS8P62241 208 aaKnown RBP19.57■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC191Q8NCU4 936 aa19.57■□□□□ 0.72
CSMD1-207ENST00000520451 RIMBP2O15034 1052 aa19.56■□□□□ 0.72
CSMD1-207ENST00000520451 PCCAP05165 728 aaPredicted RBP19.56■□□□□ 0.72
CSMD1-207ENST00000520451 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
CSMD1-207ENST00000520451 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
CSMD1-207ENST00000520451 DBNDD1Q9H9R9 158 aa19.56■□□□□ 0.72
CSMD1-207ENST00000520451 CWC25Q9NXE8 425 aaPredicted RBP19.56■□□□□ 0.72
CSMD1-207ENST00000520451 POLLQ9UGP5 575 aa19.56■□□□□ 0.72
CSMD1-207ENST00000520451 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
CSMD1-207ENST00000520451 PAXIP1Q6ZW49 1069 aaPredicted RBP19.55■□□□□ 0.72
CSMD1-207ENST00000520451 TRPM4Q8TD43 1214 aa19.55■□□□□ 0.72
CSMD1-207ENST00000520451 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
CSMD1-207ENST00000520451 EYA3Q99504 573 aa19.55■□□□□ 0.72
CSMD1-207ENST00000520451 METTL22Q9BUU2 404 aaPredicted RBP19.55■□□□□ 0.72
CSMD1-207ENST00000520451 SEC31BQ9NQW1 1179 aa19.55■□□□□ 0.72
CSMD1-207ENST00000520451 CNOT7Q9UIV1 285 aaKnown RBP19.55■□□□□ 0.72
CSMD1-207ENST00000520451 SHTN1A0MZ66 631 aa19.54■□□□□ 0.72
CSMD1-207ENST00000520451 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
CSMD1-207ENST00000520451 CST9Q5W186 159 aa19.54■□□□□ 0.72
CSMD1-207ENST00000520451 GLIS2Q9BZE0 524 aaPredicted RBP19.54■□□□□ 0.72
CSMD1-207ENST00000520451 WBP1LQ9NX94 342 aa19.54■□□□□ 0.72
CSMD1-207ENST00000520451 MAP3K2Q9Y2U5 619 aa19.54■□□□□ 0.72
CSMD1-207ENST00000520451 ZBTB12Q9Y330 459 aaPredicted RBP19.54■□□□□ 0.72
CSMD1-207ENST00000520451 H7C1D1 291 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 PSMD14O00487 310 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 ECE2O60344 883 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 PDE8AO60658 829 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 HIRAP54198 1017 aaPredicted RBP19.53■□□□□ 0.72
CSMD1-207ENST00000520451 DOK7Q18PE1 504 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 MICALL2Q8IY33 904 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 TBC1D16Q8TBP0 767 aa19.53■□□□□ 0.72
CSMD1-207ENST00000520451 GPR101Q96P66 508 aaPredicted RBP19.53■□□□□ 0.72
CSMD1-207ENST00000520451 CCDC85AQ96PX6 553 aaPredicted RBP19.53■□□□□ 0.72
CSMD1-207ENST00000520451 GRM1Q13255 1194 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 ZC3H15Q8WU90 426 aaKnown RBP19.52■□□□□ 0.72
CSMD1-207ENST00000520451 CAPNS2Q96L46 248 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 STK31Q9BXU1 1019 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 ANKIB1Q9P2G1 1089 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.72
CSMD1-207ENST00000520451 TLL2Q9Y6L7 1015 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms