RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 RBM17Q96I25 401 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 NLRP3Q96P20 1036 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 RTFDC1Q9BY42 306 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 ZBTB3Q9H5J0 574 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 DDX21Q9NR30 783 aaKnown RBP eCLIP7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 ZNF277Q9NRM2 450 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 TRIM35Q9UPQ4 493 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 ANKRD36CQ5JPF3 1778 aa7.41□□□□□ -1.22
CTNNA1-219ENST00000520158 FAM177BA6PVY3 158 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 BBOX1O75936 387 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 C7P10643 843 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 GPTP24298 496 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 HSP90AB3PQ58FF7 597 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 COPS6Q7L5N1 327 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 RUNDC1Q96C34 613 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 UTP14AQ9BVJ6 771 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 ATP6V0A2Q9Y487 856 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 ZNF541Q9H0D2 1346 aa7.4□□□□□ -1.22
CTNNA1-219ENST00000520158 COL4A5P29400 1685 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 ZNF853P0CG23 659 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 BRD2P25440 801 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 EPHX2P34913 555 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 FGD1P98174 961 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 TRIM28Q13263 835 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 PROSER3Q2NL68 480 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 COL13A1Q5TAT6 717 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 C3orf67Q6ZVT6 689 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 NLRP10Q86W26 655 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 SP8Q8IXZ3 490 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 JDP2Q8WYK2 163 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 SLC39A7Q92504 469 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 CFAP44Q96MT7 982 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 ADAMTS8Q9UP79 889 aa7.39□□□□□ -1.23
CTNNA1-219ENST00000520158 CNTNAP1P78357 1384 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 TMEM88BA6NKF7 163 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 PPEF1O14829 653 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 EIF2S2P20042 333 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 DDX10Q13206 875 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 SUPT20HQ8NEM7 779 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 PLBD2Q8NHP8 589 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 XAGE3Q8WTP9 111 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 PHF12Q96QT6 1004 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 DBF4Q9UBU7 674 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 PGAP2Q9UHJ9 254 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 LAMB2P55268 1798 aa7.38□□□□□ -1.23
CTNNA1-219ENST00000520158 ABCC4O15439 1325 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 SH3TC1Q8TE82 1336 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 RASSF10A6NK89 507 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 HSPA1AP0DMV8 641 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 HSPA1BP0DMV9 641 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 SCNN1DP51172 638 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 SF3B3Q15393 1217 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 ANKRD13DQ6ZTN6 518 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 USP50Q70EL3 339 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 CNTROBQ8N137 903 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 LARGE2Q8N3Y3 721 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 PRKRIP1Q9H875 184 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 HYPKQ9NX55 129 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 ZNRF3Q9ULT6 936 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 LTBP1Q14766 1721 aa7.37□□□□□ -1.23
CTNNA1-219ENST00000520158 PCNTO95613 3336 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 CDHR2Q9BYE9 1310 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 ATMINO43313 823 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 ANXA1P04083 346 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 EPS15P42566 896 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 CXCL9Q07325 125 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 KIAA2012Q0VF49 1180 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 GRAPQ13588 217 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 WDR43Q15061 677 aaKnown RBP eCLIP7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 KRT24Q2M2I5 525 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 GRAPLQ8TC17 118 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 TMX4Q9H1E5 349 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 PRDM10Q9NQV6 1147 aa7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 TRMT112Q9UI30 125 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-219ENST00000520158 LRRC37AA6NMS7 1700 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 PPIP5K2O43314 1243 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 HCLS1P14317 486 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 VEGFBP49765 207 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 AIMP1Q12904 312 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 DEFB115Q30KQ5 88 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 EAPPQ56P03 285 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 HDGFL1Q5TGJ6 251 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 DUSP27Q5VZP5 1158 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 DDX46Q7L014 1031 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 NIM1KQ8IY84 436 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 CCDC146Q8IYE0 955 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 MPNDQ8N594 471 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 ZC3H15Q8WU90 426 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 SCUBE2Q9NQ36 999 aa7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 ADARB2Q9NS39 739 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-219ENST00000520158 MBIPQ9NS73 344 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms