RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MX2P20592 715 aa7.73□□□□□ -1.17
SQLE-202ENST00000518604 CTBSQ01459 385 aa7.73□□□□□ -1.17
SQLE-202ENST00000518604 EAPPQ56P03 285 aaPredicted RBP7.73□□□□□ -1.17
SQLE-202ENST00000518604 IRF7Q92985 503 aa7.73□□□□□ -1.17
SQLE-202ENST00000518604 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
SQLE-202ENST00000518604 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.73□□□□□ -1.17
SQLE-202ENST00000518604 RBM47A0AV96 593 aaKnown RBP7.72□□□□□ -1.17
SQLE-202ENST00000518604 A6NHS1 94 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 BMP4P12644 408 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 TARSP26639 723 aaKnown RBP7.72□□□□□ -1.17
SQLE-202ENST00000518604 MAP2K3P46734 347 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 VEGFBP49765 207 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 NFX1Q12986 1120 aaKnown RBP7.72□□□□□ -1.17
SQLE-202ENST00000518604 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 BCL2L13Q9BXK5 485 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
SQLE-202ENST00000518604 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 PHACTR2O75167 634 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 RARAP10276 462 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 SOX18P35713 384 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 GAS6Q14393 721 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 ZNF326Q5BKZ1 582 aaKnown RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 ZNF468Q5VIY5 522 aaPredicted RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 CSRNP1Q96S65 589 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 TLR7Q9NYK1 1049 aaKnown RBP7.71□□□□□ -1.18
SQLE-202ENST00000518604 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
SQLE-202ENST00000518604 C2CD2LO14523 706 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
SQLE-202ENST00000518604 SIN3BO75182 1162 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 WFS1O76024 890 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 P4HBP07237 508 aaKnown RBP7.7□□□□□ -1.18
SQLE-202ENST00000518604 ARAFP10398 606 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
SQLE-202ENST00000518604 NFKB1P19838 968 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 ATP2B2Q01814 1243 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 PCSK7Q16549 785 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 ALG1LQ6GMV1 187 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 OR13H1Q8NG92 308 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 FBF1Q8TES7 1133 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 BHMTQ93088 406 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 BCL11AQ9H165 835 aa7.7□□□□□ -1.18
SQLE-202ENST00000518604 MMP20O60882 483 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 PSAPP07602 524 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 MAPK8P45983 427 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 GRIN2CQ14957 1233 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 KRT25Q7Z3Z0 450 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 FOXD4L4Q8WXT5 416 aaPredicted RBP7.69□□□□□ -1.18
SQLE-202ENST00000518604 ZFATQ9P243 1243 aa7.69□□□□□ -1.18
SQLE-202ENST00000518604 PHF20L1A8MW92 1017 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 WIPF1O43516 503 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
SQLE-202ENST00000518604 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
SQLE-202ENST00000518604 CES1P23141 567 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 ITGAEP38570 1179 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 NRLP54845 237 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 PLAURQ03405 335 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 SRSF11Q05519 484 aaKnown RBP7.68□□□□□ -1.18
SQLE-202ENST00000518604 ORC1Q13415 861 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 SYT9Q86SS6 491 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
SQLE-202ENST00000518604 CHRDQ9H2X0 955 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 CNTN3Q9P232 1028 aa7.68□□□□□ -1.18
SQLE-202ENST00000518604 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
SQLE-202ENST00000518604 PNMA6FA0A0J9YX94 578 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 ADH6P28332 368 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
SQLE-202ENST00000518604 TRPM4Q8TD43 1214 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 FRMD6Q96NE9 622 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
SQLE-202ENST00000518604 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 EDN3P14138 238 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 ZNF16P17020 682 aaPredicted RBP7.66□□□□□ -1.18
SQLE-202ENST00000518604 HYAL2Q12891 473 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 GALNT12Q8IXK2 581 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 GIPC2Q8TF65 315 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 TNFRSF25Q93038 417 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 GDF2Q9UK05 429 aaPredicted RBP7.66□□□□□ -1.18
SQLE-202ENST00000518604 IGF1RP08069 1367 aa7.66□□□□□ -1.18
SQLE-202ENST00000518604 ADARB2-AS1A8MUL3 147 aa7.65□□□□□ -1.18
SQLE-202ENST00000518604 KIF4AO95239 1232 aa7.65□□□□□ -1.18
SQLE-202ENST00000518604 GPLD1P80108 840 aa7.65□□□□□ -1.18
SQLE-202ENST00000518604 RAB44Q7Z6P3 723 aaPredicted RBP7.65□□□□□ -1.18
SQLE-202ENST00000518604 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
SQLE-202ENST00000518604 SALL4Q9UJQ4 1053 aa7.65□□□□□ -1.18
SQLE-202ENST00000518604 GIPC1O14908 333 aa7.64□□□□□ -1.19
SQLE-202ENST00000518604 EREGO14944 169 aa7.64□□□□□ -1.19
SQLE-202ENST00000518604 PCBP4P57723 403 aaKnown RBP7.64□□□□□ -1.19
SQLE-202ENST00000518604 RNFT1Q5M7Z0 435 aa7.64□□□□□ -1.19
SQLE-202ENST00000518604 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
SQLE-202ENST00000518604 LOC102724428A0A0B4J2F2 783 aa7.63□□□□□ -1.19
SQLE-202ENST00000518604 CYP2E1P05181 493 aaPredicted RBP7.63□□□□□ -1.19
SQLE-202ENST00000518604 SIK1P57059 783 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms