RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 TTLL11Q8NHH1 800 aa14.92□□□□□ -0.02
AP3B1-203ENST00000517940 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
AP3B1-203ENST00000517940 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
AP3B1-203ENST00000517940 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
AP3B1-203ENST00000517940 LTBP1Q14766 1721 aa14.92□□□□□ -0.02
AP3B1-203ENST00000517940 RTL9Q8NET4 1388 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 HOXA10P31260 410 aaPredicted RBP14.91□□□□□ -0.02
AP3B1-203ENST00000517940 C2CD5Q86YS7 1000 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 GREM2Q9H772 168 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 C1orf115Q9H7X2 142 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 SEC31BQ9NQW1 1179 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
AP3B1-203ENST00000517940 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
AP3B1-203ENST00000517940 GTF2E1P29083 439 aaPredicted RBP14.9□□□□□ -0.02
AP3B1-203ENST00000517940 TGFB2P61812 414 aa14.9□□□□□ -0.02
AP3B1-203ENST00000517940 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
AP3B1-203ENST00000517940 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
AP3B1-203ENST00000517940 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
AP3B1-203ENST00000517940 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
AP3B1-203ENST00000517940 PPP1R1BQ9UD71 204 aaPredicted RBP14.9□□□□□ -0.02
AP3B1-203ENST00000517940 PDE6BP35913 854 aa14.89□□□□□ -0.03
AP3B1-203ENST00000517940 RFX5P48382 616 aaPredicted RBP14.89□□□□□ -0.03
AP3B1-203ENST00000517940 NLRP3Q96P20 1036 aa14.89□□□□□ -0.03
AP3B1-203ENST00000517940 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
AP3B1-203ENST00000517940 NPHP1O15259 732 aa14.88□□□□□ -0.03
AP3B1-203ENST00000517940 UBTFL1P0CB47 393 aaPredicted RBP14.88□□□□□ -0.03
AP3B1-203ENST00000517940 IRX6P78412 446 aaPredicted RBP14.88□□□□□ -0.03
AP3B1-203ENST00000517940 STYK1Q6J9G0 422 aa14.88□□□□□ -0.03
AP3B1-203ENST00000517940 LMBR1LQ6UX01 489 aa14.88□□□□□ -0.03
AP3B1-203ENST00000517940 C7orf43Q8WVR3 580 aa14.88□□□□□ -0.03
AP3B1-203ENST00000517940 CELF1Q92879 486 aaKnown RBP14.88□□□□□ -0.03
AP3B1-203ENST00000517940 DUOX1Q9NRD9 1551 aa14.88□□□□□ -0.03
AP3B1-203ENST00000517940 GNAI3P08754 354 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 MS4A1P11836 297 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 NPR1P16066 1061 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 SIRT2Q8IXJ6 389 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
AP3B1-203ENST00000517940 FER1L6Q2WGJ9 1857 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 PNMA6EA0A0J9YXQ4 647 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 H0YIN7 160 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 YBX3P16989 372 aaKnown RBP eCLIP14.86□□□□□ -0.03
AP3B1-203ENST00000517940 MTX1Q13505 466 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
AP3B1-203ENST00000517940 GNAI2P04899 355 aa14.85□□□□□ -0.03
AP3B1-203ENST00000517940 ITGA6P23229 1130 aa14.85□□□□□ -0.03
AP3B1-203ENST00000517940 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
AP3B1-203ENST00000517940 CEP85Q6P2H3 762 aa14.85□□□□□ -0.03
AP3B1-203ENST00000517940 KLHDC4Q8TBB5 520 aa14.85□□□□□ -0.03
AP3B1-203ENST00000517940 GRAPQ13588 217 aa14.84□□□□□ -0.03
AP3B1-203ENST00000517940 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
AP3B1-203ENST00000517940 GRAPLQ8TC17 118 aaPredicted RBP14.84□□□□□ -0.03
AP3B1-203ENST00000517940 ZNF622Q969S3 477 aaKnown RBP eCLIP14.84□□□□□ -0.033e-9■■■□□ 16.7
AP3B1-203ENST00000517940 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
AP3B1-203ENST00000517940 PDZRN3Q9UPQ7 1066 aa14.84□□□□□ -0.03
AP3B1-203ENST00000517940 PCDHB15Q9Y5E8 787 aa14.84□□□□□ -0.03
AP3B1-203ENST00000517940 CENPBP07199 599 aaPredicted RBP14.83□□□□□ -0.04
AP3B1-203ENST00000517940 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.04
AP3B1-203ENST00000517940 POLA2Q14181 598 aa14.83□□□□□ -0.04
AP3B1-203ENST00000517940 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
AP3B1-203ENST00000517940 TTLL6Q8N841 843 aa14.82□□□□□ -0.04
AP3B1-203ENST00000517940 RBM17Q96I25 401 aaKnown RBP14.82□□□□□ -0.04
AP3B1-203ENST00000517940 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
AP3B1-203ENST00000517940 PIM2Q9P1W9 311 aa14.82□□□□□ -0.04
AP3B1-203ENST00000517940 PA2G4Q9UQ80 394 aaKnown RBP14.82□□□□□ -0.04
AP3B1-203ENST00000517940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.82□□□□□ -0.04
AP3B1-203ENST00000517940 COL4A5P29400 1685 aa14.81□□□□□ -0.04
AP3B1-203ENST00000517940 WTIPA6NIX2 430 aaPredicted RBP14.81□□□□□ -0.04
AP3B1-203ENST00000517940 HSP90B1P14625 803 aaKnown RBP14.81□□□□□ -0.04
AP3B1-203ENST00000517940 PRELPP51888 382 aa14.81□□□□□ -0.04
AP3B1-203ENST00000517940 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
AP3B1-203ENST00000517940 DDX46Q7L014 1031 aaKnown RBP14.81□□□□□ -0.04
AP3B1-203ENST00000517940 SSH3Q8TE77 659 aa14.81□□□□□ -0.04
AP3B1-203ENST00000517940 CNKSR1Q969H4 720 aa14.81□□□□□ -0.04
AP3B1-203ENST00000517940 SBF1O95248 1867 aa14.8□□□□□ -0.04
AP3B1-203ENST00000517940 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
AP3B1-203ENST00000517940 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
AP3B1-203ENST00000517940 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
AP3B1-203ENST00000517940 DALRD3Q5D0E6 543 aaKnown RBP14.8□□□□□ -0.04
AP3B1-203ENST00000517940 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
AP3B1-203ENST00000517940 NFKBIEO00221 500 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 SRGAP3O43295 1099 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 C21orf2O43822 256 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 IFIT5Q13325 482 aaKnown RBP14.79□□□□□ -0.04
AP3B1-203ENST00000517940 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 BCS1LQ9Y276 419 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 ATP6V0A2Q9Y487 856 aa14.79□□□□□ -0.04
AP3B1-203ENST00000517940 IRS2Q9Y4H2 1338 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 ANKRD18BA2A2Z9 1011 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 BBOX1O75936 387 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 ALDH1B1P30837 517 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 VGLL2Q8N8G2 317 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 BSDC1Q9NW68 430 aaPredicted RBP14.78□□□□□ -0.04
AP3B1-203ENST00000517940 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
AP3B1-203ENST00000517940 MINPP1Q9UNW1 487 aa14.78□□□□□ -0.04
AP3B1-203ENST00000517940 RIPOR2Q9Y4F9 1068 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms