RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 GNAT3A8MTJ3 354 aa9.71□□□□□ -0.86
PVT1-206ENST00000517838 IARSP41252 1262 aaKnown RBP9.71□□□□□ -0.86
PVT1-206ENST00000517838 CST9Q5W186 159 aa9.71□□□□□ -0.86
PVT1-206ENST00000517838 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.86
PVT1-206ENST00000517838 CAPNS2Q96L46 248 aa9.71□□□□□ -0.86
PVT1-206ENST00000517838 GPR101Q96P66 508 aaPredicted RBP9.71□□□□□ -0.86
PVT1-206ENST00000517838 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
PVT1-206ENST00000517838 ANKRD31Q8N7Z5 1873 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 C2orf72A6NCS6 295 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 SNPHO15079 494 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 HOXB3P14651 431 aaPredicted RBP9.7□□□□□ -0.86
PVT1-206ENST00000517838 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 TSKSQ9UJT2 592 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
PVT1-206ENST00000517838 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
PVT1-206ENST00000517838 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 TRAF5O00463 557 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 EPS15P42566 896 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 SCNN1DP51172 638 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
PVT1-206ENST00000517838 GJA3Q9Y6H8 435 aa9.69□□□□□ -0.86
PVT1-206ENST00000517838 SNED1Q8TER0 1413 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
PVT1-206ENST00000517838 ECE1P42892 770 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 GRM1Q13255 1194 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 HLFQ16534 295 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
PVT1-206ENST00000517838 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
PVT1-206ENST00000517838 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 JDP2Q8WYK2 163 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 PSMD1Q99460 953 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 ADAMTSL1Q8N6G6 1762 aa9.68□□□□□ -0.86
PVT1-206ENST00000517838 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
PVT1-206ENST00000517838 AOC2O75106 756 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 MAP2K2P36507 400 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 WDR43Q15061 677 aaKnown RBP eCLIP9.67□□□□□ -0.86
PVT1-206ENST00000517838 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 SLC51AQ86UW1 340 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
PVT1-206ENST00000517838 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 MCOLN1Q9GZU1 580 aa9.67□□□□□ -0.86
PVT1-206ENST00000517838 DICER1Q9UPY3 1922 aaKnown RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 SCN4AP35499 1836 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 UBR2Q8IWV8 1755 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 ST18O60284 1047 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 SNRPA1P09661 255 aaKnown RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 EIF6P56537 245 aaKnown RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 USP50Q70EL3 339 aaPredicted RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 SAPCD2Q86UD0 394 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 GPHNQ9NQX3 736 aaPredicted RBP9.66□□□□□ -0.86
PVT1-206ENST00000517838 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
PVT1-206ENST00000517838 COL4A5P29400 1685 aa9.65□□□□□ -0.86
PVT1-206ENST00000517838 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.86
PVT1-206ENST00000517838 IRX6P78412 446 aaPredicted RBP9.65□□□□□ -0.86
PVT1-206ENST00000517838 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
PVT1-206ENST00000517838 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
PVT1-206ENST00000517838 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
PVT1-206ENST00000517838 CRISPLD2Q9H0B8 497 aa9.65□□□□□ -0.86
PVT1-206ENST00000517838 VIRMAQ69YN4 1812 aaKnown RBP9.65□□□□□ -0.86
PVT1-206ENST00000517838 HOXA10P31260 410 aaPredicted RBP9.64□□□□□ -0.87
PVT1-206ENST00000517838 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
PVT1-206ENST00000517838 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
PVT1-206ENST00000517838 ABCC12Q96J65 1359 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
PVT1-206ENST00000517838 CA12O43570 354 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 CELF2O95319 508 aaKnown RBP9.63□□□□□ -0.87
PVT1-206ENST00000517838 MCM10Q7L590 875 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 HHIPL1Q96JK4 782 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 ADARB2Q9NS39 739 aaKnown RBP9.63□□□□□ -0.87
PVT1-206ENST00000517838 GPRC5DQ9NZD1 345 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 PGAP2Q9UHJ9 254 aa9.63□□□□□ -0.87
PVT1-206ENST00000517838 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
PVT1-206ENST00000517838 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 PRKAR2BP31323 418 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
PVT1-206ENST00000517838 FOXK1P85037 733 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 DGKZQ13574 1117 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 DCTN1Q14203 1278 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 CIAPIN1Q6FI81 312 aa9.62□□□□□ -0.87
PVT1-206ENST00000517838 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
PVT1-206ENST00000517838 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms