RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	TTLL11	Q8NHH1	800 aa		18.34	■□□□□ 0.53
MATR3-238	ENST00000512107	EXOC6	Q8TAG9	804 aa		18.34	■□□□□ 0.53
MATR3-238	ENST00000512107	SEC31B	Q9NQW1	1179 aa		18.34	■□□□□ 0.53
MATR3-238	ENST00000512107	DCAF8L1	A6NGE4	600 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	NPHP1	O15259	732 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	CSF1R	P07333	972 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	SRGN	P10124	158 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	CTSW	P56202	376 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	SYT17	Q9BSW7	474 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	ZBTB40	Q9NUA8	1239 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	CD2AP	Q9Y5K6	639 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	SLX4	Q8IY92	1834 aa		18.33	■□□□□ 0.52
MATR3-238	ENST00000512107	CENPB	P07199	599 aa	Predicted RBP	18.32	■□□□□ 0.52
MATR3-238	ENST00000512107	SF3B3	Q15393	1217 aa	Known RBP	18.32	■□□□□ 0.52
MATR3-238	ENST00000512107	LMBR1L	Q6UX01	489 aa		18.32	■□□□□ 0.52
MATR3-238	ENST00000512107	GREM2	Q9H772	168 aa		18.32	■□□□□ 0.52
MATR3-238	ENST00000512107	SPEF2	Q9C093	1822 aa		18.32	■□□□□ 0.52
MATR3-238	ENST00000512107	UBTFL1	P0CB47	393 aa	Predicted RBP	18.31	■□□□□ 0.52
MATR3-238	ENST00000512107	FAM161A	Q3B820	660 aa		18.31	■□□□□ 0.52
MATR3-238	ENST00000512107	RABL6	Q3YEC7	729 aa	Predicted RBP	18.31	■□□□□ 0.52
MATR3-238	ENST00000512107	NLRP3	Q96P20	1036 aa		18.31	■□□□□ 0.52
MATR3-238	ENST00000512107	MS4A1	P11836	297 aa		18.3	■□□□□ 0.52
MATR3-238	ENST00000512107	PDE6B	P35913	854 aa		18.3	■□□□□ 0.52
MATR3-238	ENST00000512107	OLFM4	Q6UX06	510 aa		18.3	■□□□□ 0.52
MATR3-238	ENST00000512107	CELF1	Q92879	486 aa	Known RBP	18.3	■□□□□ 0.52
MATR3-238	ENST00000512107	HOXA10	P31260	410 aa	Predicted RBP	18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	RFX5	P48382	616 aa	Predicted RBP	18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	SIRT2	Q8IXJ6	389 aa		18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	KLHDC4	Q8TBB5	520 aa		18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	ZNF594	Q96JF6	807 aa	Predicted RBP	18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	DDX19B	Q9UMR2	479 aa		18.29	■□□□□ 0.52
MATR3-238	ENST00000512107	PNMA6E	A0A0J9YXQ4	647 aa		18.28	■□□□□ 0.52
MATR3-238	ENST00000512107	GNAI3	P08754	354 aa		18.28	■□□□□ 0.52
MATR3-238	ENST00000512107	TGFB2	P61812	414 aa		18.28	■□□□□ 0.52
MATR3-238	ENST00000512107	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
MATR3-238	ENST00000512107		H0YIN7	160 aa		18.27	■□□□□ 0.52
MATR3-238	ENST00000512107	GNAI2	P04899	355 aa		18.27	■□□□□ 0.52
MATR3-238	ENST00000512107	PCDHB15	Q9Y5E8	787 aa		18.27	■□□□□ 0.52
MATR3-238	ENST00000512107	NPR1	P16066	1061 aa		18.26	■□□□□ 0.51
MATR3-238	ENST00000512107	STYK1	Q6J9G0	422 aa		18.26	■□□□□ 0.51
MATR3-238	ENST00000512107	CEP85	Q6P2H3	762 aa		18.26	■□□□□ 0.51
MATR3-238	ENST00000512107	MASTL	Q96GX5	879 aa		18.26	■□□□□ 0.51
MATR3-238	ENST00000512107	RTL9	Q8NET4	1388 aa		18.26	■□□□□ 0.51
MATR3-238	ENST00000512107	ITGA6	P23229	1130 aa		18.25	■□□□□ 0.51
MATR3-238	ENST00000512107	PUS3	Q9BZE2	481 aa	Known RBP	18.25	■□□□□ 0.51
MATR3-238	ENST00000512107	PA2G4	Q9UQ80	394 aa	Known RBP	18.25	■□□□□ 0.51
MATR3-238	ENST00000512107	CHMP3	Q9Y3E7	222 aa		18.25	■□□□□ 0.51
MATR3-238	ENST00000512107	WTIP	A6NIX2	430 aa	Predicted RBP	18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	ATP8B2	P98198	1209 aa		18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	CCDC152	Q4G0S7	254 aa		18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	C7orf43	Q8WVR3	580 aa		18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	RPGR	Q92834	1020 aa	Known RBP	18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	CRAMP1	Q96RY5	1269 aa		18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.24	■□□□□ 0.51
MATR3-238	ENST00000512107		A0A1B0GUL6	1792 aa		18.24	■□□□□ 0.51
MATR3-238	ENST00000512107	SNED1	Q8TER0	1413 aa		18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	YBX3	P16989	372 aa	Known RBP eCLIP	18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	MTX1	Q13505	466 aa		18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	GRAP	Q13588	217 aa		18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	POLA2	Q14181	598 aa		18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	PRPF40B	Q6NWY9	871 aa	Known RBP	18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	GRAPL	Q8TC17	118 aa	Predicted RBP	18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	RBM17	Q96I25	401 aa	Known RBP	18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	LRRC37A	A6NMS7	1700 aa		18.23	■□□□□ 0.51
MATR3-238	ENST00000512107	PTPN12	Q05209	780 aa	Known RBP	18.22	■□□□□ 0.51
MATR3-238	ENST00000512107	DDX46	Q7L014	1031 aa	Known RBP	18.22	■□□□□ 0.51
MATR3-238	ENST00000512107	LRRC24	Q50LG9	513 aa		18.21	■□□□□ 0.51
MATR3-238	ENST00000512107	PIM2	Q9P1W9	311 aa		18.21	■□□□□ 0.51
MATR3-238	ENST00000512107	ARFGEF1	Q9Y6D6	1849 aa		18.21	■□□□□ 0.51
MATR3-238	ENST00000512107	LTBP1	Q14766	1721 aa		18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	ANKRD18B	A2A2Z9	1011 aa		18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	SRGAP3	O43295	1099 aa		18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	RPS8	P62241	208 aa	Known RBP	18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	TTLL6	Q8N841	843 aa		18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	SSH3	Q8TE77	659 aa		18.2	■□□□□ 0.5
MATR3-238	ENST00000512107	PPEF1	O14829	653 aa	Predicted RBP	18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	C21orf2	O43822	256 aa		18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	IFIT5	Q13325	482 aa	Known RBP	18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	CNKSR1	Q969H4	720 aa		18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	DUOX1	Q9NRD9	1551 aa		18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	PDZRN3	Q9UPQ7	1066 aa		18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	BCS1L	Q9Y276	419 aa		18.19	■□□□□ 0.5
MATR3-238	ENST00000512107	SNAP23	O00161	211 aa		18.18	■□□□□ 0.5
MATR3-238	ENST00000512107	HSP90B1	P14625	803 aa	Known RBP	18.18	■□□□□ 0.5
MATR3-238	ENST00000512107	PRELP	P51888	382 aa		18.18	■□□□□ 0.5
MATR3-238	ENST00000512107	ATG9A	Q7Z3C6	839 aa		18.18	■□□□□ 0.5
MATR3-238	ENST00000512107	GPSM2	P81274	684 aa		18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	CCDC57	Q2TAC2	916 aa		18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	DALRD3	Q5D0E6	543 aa	Known RBP	18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	ANKRD18A	Q8IVF6	992 aa		18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	SIL1	Q9H173	461 aa		18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	RIPOR2	Q9Y4F9	1068 aa		18.17	■□□□□ 0.5
MATR3-238	ENST00000512107	FER1L6	Q2WGJ9	1857 aa		18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	IGHD	P01880	384 aa		18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	ALDH1B1	P30837	517 aa		18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	HELB	Q8NG08	1087 aa	Predicted RBP	18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	GPR101	Q96P66	508 aa	Predicted RBP	18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	COPRS	Q9NQ92	184 aa		18.16	■□□□□ 0.5
MATR3-238	ENST00000512107	MINPP1	Q9UNW1	487 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 101 ms