RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
PFDN1-203ENST00000510217 MYD88Q99836 296 aa13.26□□□□□ -0.29
PFDN1-203ENST00000510217 CACNA1FO60840 1977 aa13.25□□□□□ -0.29
PFDN1-203ENST00000510217 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-203ENST00000510217 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
PFDN1-203ENST00000510217 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-203ENST00000510217 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
PFDN1-203ENST00000510217 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-203ENST00000510217 MYH3P11055 1940 aa13.25□□□□□ -0.29
PFDN1-203ENST00000510217 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 HTRA3P83110 453 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
PFDN1-203ENST00000510217 WDR63Q8IWG1 891 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-203ENST00000510217 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-203ENST00000510217 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
PFDN1-203ENST00000510217 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 CCER2I3L3R5 266 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 IRS4O14654 1257 aaPredicted RBP13.23□□□□□ -0.29
PFDN1-203ENST00000510217 BBOX1O75936 387 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
PFDN1-203ENST00000510217 AOC3Q16853 763 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 G2E3Q7L622 706 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 SP8Q8IXZ3 490 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 JDP2Q8WYK2 163 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
PFDN1-203ENST00000510217 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
PFDN1-203ENST00000510217 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-203ENST00000510217 IGKV5-2P06315 115 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-203ENST00000510217 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 GPC2Q8N158 579 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
PFDN1-203ENST00000510217 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
PFDN1-203ENST00000510217 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-203ENST00000510217 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-203ENST00000510217 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 DNAJC5GQ8N7S2 189 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-203ENST00000510217 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 HACL1Q9UJ83 578 aa13.21□□□□□ -0.29
PFDN1-203ENST00000510217 CDHR2Q9BYE9 1310 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 VAMP4O75379 141 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
PFDN1-203ENST00000510217 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
PFDN1-203ENST00000510217 FLIIQ13045 1269 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 LDHDQ86WU2 507 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 MPNDQ8N594 471 aa13.2□□□□□ -0.3
PFDN1-203ENST00000510217 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-203ENST00000510217 EPHX2P34913 555 aa13.19□□□□□ -0.3
PFDN1-203ENST00000510217 SCNN1DP51172 638 aa13.19□□□□□ -0.3
PFDN1-203ENST00000510217 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
PFDN1-203ENST00000510217 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
PFDN1-203ENST00000510217 SEC31BQ9NQW1 1179 aa13.19□□□□□ -0.3
PFDN1-203ENST00000510217 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
PFDN1-203ENST00000510217 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
PFDN1-203ENST00000510217 PDE8AO60658 829 aa13.18□□□□□ -0.3
PFDN1-203ENST00000510217 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
PFDN1-203ENST00000510217 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
PFDN1-203ENST00000510217 CTSWP56202 376 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 GPSM2P81274 684 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 NEXNQ0ZGT2 675 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
PFDN1-203ENST00000510217 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
PFDN1-203ENST00000510217 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 PSME4Q14997 1843 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
PFDN1-203ENST00000510217 CXCL9Q07325 125 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-203ENST00000510217 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-203ENST00000510217 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-203ENST00000510217 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 SCN9AQ15858 1988 aa13.16□□□□□ -0.3
PFDN1-203ENST00000510217 A0A1B0GUL6 1792 aa13.15□□□□□ -0.3
PFDN1-203ENST00000510217 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-203ENST00000510217 EPS15P42566 896 aa13.15□□□□□ -0.3
PFDN1-203ENST00000510217 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
PFDN1-203ENST00000510217 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
PFDN1-203ENST00000510217 RTL9Q8NET4 1388 aa13.15□□□□□ -0.3
PFDN1-203ENST00000510217 ZNF646O15015 1829 aaPredicted RBP13.15□□□□□ -0.3
PFDN1-203ENST00000510217 H7C1W4 665 aa13.14□□□□□ -0.31
PFDN1-203ENST00000510217 CASP7P55210 303 aa13.14□□□□□ -0.31
PFDN1-203ENST00000510217 GCKRQ14397 625 aa13.14□□□□□ -0.31
PFDN1-203ENST00000510217 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms