RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 MKNK2Q9HBH9 465 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 ORC3Q9UBD5 711 aaPredicted RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 TERF1P54274 439 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
TRIO-214ENST00000509967 CUL5Q93034 780 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 TAOK3Q9H2K8 898 aa10.66□□□□□ -0.7
TRIO-214ENST00000509967 F6X3S4 739 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.7
TRIO-214ENST00000509967 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
TRIO-214ENST00000509967 KRT28Q7Z3Y7 464 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 DZIP1Q86YF9 867 aaKnown RBP10.65□□□□□ -0.7
TRIO-214ENST00000509967 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 ZNF76P36508 570 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 POLKQ9UBT6 870 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.7
TRIO-214ENST00000509967 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 SNW1Q13573 536 aaKnown RBP10.65□□□□□ -0.7
TRIO-214ENST00000509967 CEP85Q6P2H3 762 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 ZKSCAN5Q9Y2L8 839 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 MYOM2P54296 1465 aa10.65□□□□□ -0.7
TRIO-214ENST00000509967 ZPR1O75312 459 aa10.65□□□□□ -0.71
TRIO-214ENST00000509967 NAP1L4Q99733 375 aaKnown RBP10.65□□□□□ -0.71
TRIO-214ENST00000509967 USP25Q9UHP3 1055 aa10.65□□□□□ -0.71
TRIO-214ENST00000509967 POLR3DP05423 398 aaPredicted RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 TMEM67Q5HYA8 995 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 CACNA2D4Q7Z3S7 1137 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 LLPHQ9BRT6 129 aaKnown RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 CCDC8Q9H0W5 538 aaPredicted RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRIO-214ENST00000509967 GCOM1H8Y6P7 765 aaPredicted RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 MYZAPP0CAP1 466 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 CRNKL1Q9BZJ0 848 aaKnown RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 SMARCC1Q92922 1105 aaPredicted RBP10.64□□□□□ -0.71
TRIO-214ENST00000509967 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 PANK2Q9BZ23 570 aa10.64□□□□□ -0.71
TRIO-214ENST00000509967 NLRP5P59047 1200 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 EIF4A2Q14240 407 aaKnown RBP10.63□□□□□ -0.71
TRIO-214ENST00000509967 CALML3P27482 149 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 PRPHP41219 470 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 CAMK4Q16566 473 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 ESR2Q92731 530 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 ZC3H6P61129 1189 aaKnown RBP10.63□□□□□ -0.71
TRIO-214ENST00000509967 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 MPRIPQ6WCQ1 1025 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 TBX22Q9Y458 520 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 RBM8AQ9Y5S9 174 aaKnown RBP10.63□□□□□ -0.71
TRIO-214ENST00000509967 CCDC91Q7Z6B0 441 aa10.63□□□□□ -0.71
TRIO-214ENST00000509967 URI1O94763 535 aaPredicted RBP10.62□□□□□ -0.71
TRIO-214ENST00000509967 PPP4R3AQ6IN85 833 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 MEIS3Q99687 375 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 ATP10AO60312 1499 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 CYLC1P35663 651 aaPredicted RBP10.62□□□□□ -0.71
TRIO-214ENST00000509967 SYKP43405 635 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 CEP135Q66GS9 1140 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 GOLGA6L10A0A0M3HER8 536 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 ZBTB43O43298 467 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 PPP2R5BQ15173 497 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 LDHAL6AQ6ZMR3 332 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 ERMNQ8TAM6 284 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 ABCF2Q9UG63 623 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 TTC37Q6PGP7 1564 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 EXOC5O00471 708 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 USP37Q86T82 979 aa10.62□□□□□ -0.71
TRIO-214ENST00000509967 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
TRIO-214ENST00000509967 CEP112Q8N8E3 955 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 PLVAPQ9BX97 442 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 ZHX3Q9H4I2 956 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 KAT14Q9H8E8 782 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 MYO5CQ9NQX4 1742 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 WTAPQ15007 396 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 TMC6Q7Z403 805 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 PTPRTO14522 1441 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 UBA7P41226 1012 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 HSPA2P54652 639 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 MTMR7Q9Y216 660 aa10.61□□□□□ -0.71
TRIO-214ENST00000509967 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 USP26Q9BXU7 913 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRIO-214ENST00000509967 PLCG2P16885 1265 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 LUZP1Q86V48 1076 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 HLA-DOAP06340 250 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 NEFHP12036 1026 aa10.6□□□□□ -0.71
TRIO-214ENST00000509967 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms