RNA–Protein interactions for RNA: ENST00000508044.1

RACK1-218, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-218ENST00000508044 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
RACK1-218ENST00000508044 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
RACK1-218ENST00000508044 LARGE2Q8N3Y3 721 aa13.68□□□□□ -0.22
RACK1-218ENST00000508044 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
RACK1-218ENST00000508044 CACNA1FO60840 1977 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 GRAPQ13588 217 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 AOC3Q16853 763 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
RACK1-218ENST00000508044 GPC2Q8N158 579 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
RACK1-218ENST00000508044 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
RACK1-218ENST00000508044 EPHX2P34913 555 aa13.66□□□□□ -0.22
RACK1-218ENST00000508044 EIF6P56537 245 aaKnown RBP13.66□□□□□ -0.22
RACK1-218ENST00000508044 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
RACK1-218ENST00000508044 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
RACK1-218ENST00000508044 SP8Q8IXZ3 490 aa13.66□□□□□ -0.22
RACK1-218ENST00000508044 MYD88Q99836 296 aa13.66□□□□□ -0.22
RACK1-218ENST00000508044 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
RACK1-218ENST00000508044 BBOX1O75936 387 aa13.65□□□□□ -0.22
RACK1-218ENST00000508044 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
RACK1-218ENST00000508044 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
RACK1-218ENST00000508044 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
RACK1-218ENST00000508044 NIM1KQ8IY84 436 aa13.65□□□□□ -0.22
RACK1-218ENST00000508044 CELF1Q92879 486 aaKnown RBP13.65□□□□□ -0.22
RACK1-218ENST00000508044 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
RACK1-218ENST00000508044 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
RACK1-218ENST00000508044 MPNDQ8N594 471 aa13.64□□□□□ -0.23
RACK1-218ENST00000508044 RTFDC1Q9BY42 306 aaPredicted RBP13.64□□□□□ -0.23
RACK1-218ENST00000508044 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
RACK1-218ENST00000508044 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
RACK1-218ENST00000508044 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
RACK1-218ENST00000508044 SCNN1DP51172 638 aa13.63□□□□□ -0.23
RACK1-218ENST00000508044 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
RACK1-218ENST00000508044 JMYQ8N9B5 988 aa13.63□□□□□ -0.23
RACK1-218ENST00000508044 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
RACK1-218ENST00000508044 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
RACK1-218ENST00000508044 PCNTO95613 3336 aa13.63□□□□□ -0.23
RACK1-218ENST00000508044 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
RACK1-218ENST00000508044 MYH3P11055 1940 aa13.62□□□□□ -0.23
RACK1-218ENST00000508044 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
RACK1-218ENST00000508044 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
RACK1-218ENST00000508044 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
RACK1-218ENST00000508044 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
RACK1-218ENST00000508044 IL16Q14005 1332 aa13.62□□□□□ -0.23
RACK1-218ENST00000508044 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
RACK1-218ENST00000508044 DDX58O95786 925 aaKnown RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 LMOD1P29536 600 aaPredicted RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 EPS15P42566 896 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 MAP1SQ66K74 1059 aaPredicted RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 G2E3Q7L622 706 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 PNMA8AQ86V59 439 aaPredicted RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
RACK1-218ENST00000508044 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
RACK1-218ENST00000508044 PI4KAP2A4QPH2 592 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
RACK1-218ENST00000508044 CXCL9Q07325 125 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 PI4KAP1Q8N8J0 262 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
RACK1-218ENST00000508044 CHMP4AQ9BY43 222 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
RACK1-218ENST00000508044 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
RACK1-218ENST00000508044 RAD17O75943 681 aa13.59□□□□□ -0.23
RACK1-218ENST00000508044 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
RACK1-218ENST00000508044 GPSM2P81274 684 aa13.59□□□□□ -0.23
RACK1-218ENST00000508044 KSR2Q6VAB6 950 aa13.59□□□□□ -0.23
RACK1-218ENST00000508044 NSFL1CQ9UNZ2 370 aaKnown RBP13.59□□□□□ -0.23
RACK1-218ENST00000508044 YDJCA8MPS7 323 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 PDE8AO60658 829 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
RACK1-218ENST00000508044 CWF19L2Q2TBE0 894 aaKnown RBP13.58□□□□□ -0.24
RACK1-218ENST00000508044 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 GPR101Q96P66 508 aaPredicted RBP13.58□□□□□ -0.24
RACK1-218ENST00000508044 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
RACK1-218ENST00000508044 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 C6orf229H3BNL8 230 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
RACK1-218ENST00000508044 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 DBNDD1Q9H9R9 158 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
RACK1-218ENST00000508044 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 CNTNAP1P78357 1384 aa13.57□□□□□ -0.24
RACK1-218ENST00000508044 TMEM88BA6NKF7 163 aa13.56□□□□□ -0.24
RACK1-218ENST00000508044 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
RACK1-218ENST00000508044 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
RACK1-218ENST00000508044 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms