RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZDHHC9Q9Y397 364 aa21.28■■□□□ 1
SFXN1-208ENST00000507823 PALLDQ8WX93 1383 aa21.28■■□□□ 1
SFXN1-208ENST00000507823 MYH3P11055 1940 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 TOM1O60784 492 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 HLFQ16534 295 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 SKOR2Q2VWA4 1001 aaPredicted RBP21.27■■□□□ 1
SFXN1-208ENST00000507823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.27■■□□□ 1
SFXN1-208ENST00000507823 ZSWIM6Q9HCJ5 1215 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 LRRC24Q50LG9 513 aa21.27■■□□□ 1
SFXN1-208ENST00000507823 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
SFXN1-208ENST00000507823 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
SFXN1-208ENST00000507823 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
SFXN1-208ENST00000507823 PKP1Q13835 747 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 TSGA10IPQ3SY00 556 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 USPL1Q5W0Q7 1092 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 CCDC57Q2TAC2 916 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 VPS53Q5VIR6 699 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 CREB3L3Q68CJ9 461 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 EIF5P55010 431 aaKnown RBP21.25■□□□□ 0.99
SFXN1-208ENST00000507823 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
SFXN1-208ENST00000507823 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
SFXN1-208ENST00000507823 EDC3Q96F86 508 aaKnown RBP21.25■□□□□ 0.99
SFXN1-208ENST00000507823 ZNF594Q96JF6 807 aaPredicted RBP21.25■□□□□ 0.99
SFXN1-208ENST00000507823 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
SFXN1-208ENST00000507823 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-208ENST00000507823 TAF5LO75529 589 aa21.24■□□□□ 0.99
SFXN1-208ENST00000507823 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
SFXN1-208ENST00000507823 PUS3Q9BZE2 481 aaKnown RBP21.24■□□□□ 0.99
SFXN1-208ENST00000507823 AK2P54819 239 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
SFXN1-208ENST00000507823 ZNF34Q8IZ26 560 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-208ENST00000507823 LIMCH1Q9UPQ0 1083 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 GOLGA6L22H0YM25 854 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 BRD1O95696 1058 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 ZKSCAN1P17029 563 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-208ENST00000507823 RUFY3Q7L099 469 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 ZNF589Q86UQ0 364 aaPredicted RBP21.23■□□□□ 0.99
SFXN1-208ENST00000507823 HMG20BQ9P0W2 317 aa21.23■□□□□ 0.99
SFXN1-208ENST00000507823 LRP5O75197 1615 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 FSD2A1L4K1 749 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 SLC27A2O14975 620 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 ALDH8A1Q9H2A2 487 aaPredicted RBP21.22■□□□□ 0.99
SFXN1-208ENST00000507823 A0A1B0GUL7 405 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 CASTP20810 708 aaKnown RBP21.22■□□□□ 0.99
SFXN1-208ENST00000507823 ADCK5Q3MIX3 580 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 CEP126Q9P2H0 1117 aa21.22■□□□□ 0.99
SFXN1-208ENST00000507823 TIMM10P62072 90 aa21.21■□□□□ 0.99
SFXN1-208ENST00000507823 DZIP3Q86Y13 1208 aaKnown RBP21.21■□□□□ 0.99
SFXN1-208ENST00000507823 TTLL11Q8NHH1 800 aa21.21■□□□□ 0.99
SFXN1-208ENST00000507823 AKAP2Q9Y2D5 859 aa21.21■□□□□ 0.99
SFXN1-208ENST00000507823 RIC1Q4ADV7 1423 aa21.21■□□□□ 0.99
SFXN1-208ENST00000507823 COL5A3P25940 1745 aaPredicted RBP21.21■□□□□ 0.99
SFXN1-208ENST00000507823 IFIT5Q13325 482 aaKnown RBP21.21■□□□□ 0.99
SFXN1-208ENST00000507823 AK7Q96M32 723 aa21.21■□□□□ 0.99
SFXN1-208ENST00000507823 ABCC12Q96J65 1359 aa21.2■□□□□ 0.99
SFXN1-208ENST00000507823 RNF20Q5VTR2 975 aa21.2■□□□□ 0.98
SFXN1-208ENST00000507823 JAKMIP1Q96N16 626 aaKnown RBP21.2■□□□□ 0.98
SFXN1-208ENST00000507823 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
SFXN1-208ENST00000507823 CYP46A1Q9Y6A2 500 aa21.2■□□□□ 0.98
SFXN1-208ENST00000507823 CTSWP56202 376 aa21.2■□□□□ 0.98
SFXN1-208ENST00000507823 PAG1Q9NWQ8 432 aa21.2■□□□□ 0.98
SFXN1-208ENST00000507823 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
SFXN1-208ENST00000507823 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 NEUROD6Q96NK8 337 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 DNAJC2Q99543 621 aaKnown RBP21.19■□□□□ 0.98
SFXN1-208ENST00000507823 RIPOR2Q9Y4F9 1068 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 LOC102724428A0A0B4J2F2 783 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 PSMA5P28066 241 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 SIK1P57059 783 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 ZSCAN31Q96LW9 406 aaPredicted RBP21.19■□□□□ 0.98
SFXN1-208ENST00000507823 PDRG1Q9NUG6 133 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 UBN2Q6ZU65 1347 aa21.19■□□□□ 0.98
SFXN1-208ENST00000507823 GPTP24298 496 aa21.18■□□□□ 0.98
SFXN1-208ENST00000507823 HELLSQ9NRZ9 838 aa21.18■□□□□ 0.98
SFXN1-208ENST00000507823 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
SFXN1-208ENST00000507823 NUTM2BA6NNL0 878 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-208ENST00000507823 NUTM2EB1AL46 878 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-208ENST00000507823 NUTM2AQ8IVF1 878 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-208ENST00000507823 SH2B1Q9NRF2 756 aaPredicted RBP21.18■□□□□ 0.98
SFXN1-208ENST00000507823 ISY1Q9ULR0 285 aaKnown RBP21.18■□□□□ 0.98
SFXN1-208ENST00000507823 PDE8AO60658 829 aa21.17■□□□□ 0.98
SFXN1-208ENST00000507823 KLHL40Q2TBA0 621 aa21.17■□□□□ 0.98
SFXN1-208ENST00000507823 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
SFXN1-208ENST00000507823 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
SFXN1-208ENST00000507823 NDUFB9Q9Y6M9 179 aa21.17■□□□□ 0.98
SFXN1-208ENST00000507823 IRS4O14654 1257 aaPredicted RBP21.17■□□□□ 0.98
SFXN1-208ENST00000507823 CRKLP46109 303 aaKnown RBP21.17■□□□□ 0.98
SFXN1-208ENST00000507823 SMARCC1Q92922 1105 aaPredicted RBP21.17■□□□□ 0.98
SFXN1-208ENST00000507823 LMBRD1Q9NUN5 540 aa21.17■□□□□ 0.98
SFXN1-208ENST00000507823 VPS72Q15906 364 aa21.16■□□□□ 0.98
SFXN1-208ENST00000507823 ZMYM1Q5SVZ6 1142 aa21.16■□□□□ 0.98
SFXN1-208ENST00000507823 NOL8Q76FK4 1167 aaKnown RBP21.16■□□□□ 0.98
SFXN1-208ENST00000507823 U3KPZ7 1027 aaPredicted RBP21.16■□□□□ 0.98
SFXN1-208ENST00000507823 LAMB2P55268 1798 aa21.16■□□□□ 0.98
SFXN1-208ENST00000507823 IFIT1P09914 478 aaKnown RBP21.16■□□□□ 0.98
SFXN1-208ENST00000507823 KCNJ4P48050 445 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms