RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 PRDM10Q9NQV6 1147 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
TPM3-218ENST00000505010 SRP68Q9UHB9 627 aaKnown RBP11.65□□□□□ -0.54
TPM3-218ENST00000505010 MKRN1Q9UHC7 482 aaKnown RBP11.65□□□□□ -0.54
TPM3-218ENST00000505010 FOXN1O15353 648 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 GPTP24298 496 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 SMC5Q8IY18 1101 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
TPM3-218ENST00000505010 SUCLG2Q96I99 432 aa11.64□□□□□ -0.55
TPM3-218ENST00000505010 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
TPM3-218ENST00000505010 USP42Q9H9J4 1324 aaKnown RBP11.63□□□□□ -0.55
TPM3-218ENST00000505010 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
TPM3-218ENST00000505010 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 GCC1Q96CN9 775 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
TPM3-218ENST00000505010 PNMA6EA0A0J9YXQ4 647 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 POTECB2RU33 542 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 TM4SF1P30408 202 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 CTCFP49711 727 aaPredicted RBP11.62□□□□□ -0.55
TPM3-218ENST00000505010 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
TPM3-218ENST00000505010 PPP1R42Q7Z4L9 355 aa11.62□□□□□ -0.55
TPM3-218ENST00000505010 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
TPM3-218ENST00000505010 H7C1W4 665 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 ZPR1O75312 459 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 RGS3P49796 1198 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 CASP7P55210 303 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 TRIM28Q13263 835 aaKnown RBP11.61□□□□□ -0.55
TPM3-218ENST00000505010 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 TTLL6Q8N841 843 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
TPM3-218ENST00000505010 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 APBB1O00213 710 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 NUCB1Q02818 461 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 MTX1Q13505 466 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 SSH3Q8TE77 659 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
TPM3-218ENST00000505010 NARFQ9UHQ1 456 aa11.6□□□□□ -0.55
TPM3-218ENST00000505010 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
TPM3-218ENST00000505010 POLA2Q14181 598 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
TPM3-218ENST00000505010 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM3-218ENST00000505010 EXOC6BQ9Y2D4 811 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 CDHR2Q9BYE9 1310 aa11.59□□□□□ -0.55
TPM3-218ENST00000505010 CNTNAP1P78357 1384 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 H0YIN7 160 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 NFKBIEO00221 500 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 RGL2O15211 777 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 LBX1P52954 281 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 PARP10Q53GL7 1025 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 CHD1LQ86WJ1 897 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
TPM3-218ENST00000505010 FAM89AQ96GI7 184 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 ABHD8Q96I13 439 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 BCL11AQ9H165 835 aa11.58□□□□□ -0.56
TPM3-218ENST00000505010 SURF6O75683 361 aaKnown RBP11.57□□□□□ -0.56
TPM3-218ENST00000505010 VEGFBP49765 207 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 FOXO4P98177 505 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 OS9Q13438 667 aaPredicted RBP11.57□□□□□ -0.56
TPM3-218ENST00000505010 RABL6Q3YEC7 729 aaPredicted RBP11.57□□□□□ -0.56
TPM3-218ENST00000505010 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 CLEC4GQ6UXB4 293 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
TPM3-218ENST00000505010 BCL2L12Q9HB09 334 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
TPM3-218ENST00000505010 IRS4O14654 1257 aaPredicted RBP11.56□□□□□ -0.56
TPM3-218ENST00000505010 SMARCA5O60264 1052 aaPredicted RBP11.56□□□□□ -0.56
TPM3-218ENST00000505010 SERPINB2P05120 415 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 PDE4AP27815 886 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
TPM3-218ENST00000505010 NFIXQ14938 502 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 TBC1D9BQ66K14 1250 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
TPM3-218ENST00000505010 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
TPM3-218ENST00000505010 NTSR2O95665 410 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms