RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 JDP2Q8WYK2 163 aa32.55■■■□□ 2.8
PVT1-201ENST00000504719 L3MBTL3Q96JM7 780 aaPredicted RBP32.55■■■□□ 2.8
PVT1-201ENST00000504719 PI4KAP2A4QPH2 592 aa32.54■■■□□ 2.8
PVT1-201ENST00000504719 VAMP4O75379 141 aa32.54■■■□□ 2.8
PVT1-201ENST00000504719 SLC4A2P04920 1241 aa32.54■■■□□ 2.8
PVT1-201ENST00000504719 G2E3Q7L622 706 aa32.54■■■□□ 2.8
PVT1-201ENST00000504719 PI4KAP1Q8N8J0 262 aa32.54■■■□□ 2.8
PVT1-201ENST00000504719 CWC25Q9NXE8 425 aaPredicted RBP32.54■■■□□ 2.8
PVT1-201ENST00000504719 PCCAP05165 728 aaPredicted RBP32.53■■■□□ 2.8
PVT1-201ENST00000504719 EXOSC9Q06265 439 aaKnown RBP32.53■■■□□ 2.8
PVT1-201ENST00000504719 CEP350Q5VT06 3117 aa32.53■■■□□ 2.8
PVT1-201ENST00000504719 TMC4Q7Z404 712 aa32.52■■■□□ 2.8
PVT1-201ENST00000504719 LARGE2Q8N3Y3 721 aa32.52■■■□□ 2.8
PVT1-201ENST00000504719 RTFDC1Q9BY42 306 aaPredicted RBP32.52■■■□□ 2.8
PVT1-201ENST00000504719 VPS33BQ9H267 617 aa32.51■■■□□ 2.79
PVT1-201ENST00000504719 LRRC37AA6NMS7 1700 aa32.51■■■□□ 2.79
PVT1-201ENST00000504719 IQCA1LA6NCM1 817 aa32.5■■■□□ 2.79
PVT1-201ENST00000504719 HSP90B1P14625 803 aaKnown RBP32.5■■■□□ 2.79
PVT1-201ENST00000504719 MPNDQ8N594 471 aa32.5■■■□□ 2.79
PVT1-201ENST00000504719 SUPT20HQ8NEM7 779 aa32.5■■■□□ 2.79
PVT1-201ENST00000504719 CELF1Q92879 486 aaKnown RBP32.5■■■□□ 2.79
PVT1-201ENST00000504719 IGKV5-2P06315 115 aa32.49■■■□□ 2.79
PVT1-201ENST00000504719 DPP8Q6V1X1 898 aaPredicted RBP32.49■■■□□ 2.79
PVT1-201ENST00000504719 MYH16Q9H6N6 1097 aa32.49■■■□□ 2.79
PVT1-201ENST00000504719 COL4A1P02462 1669 aa32.48■■■□□ 2.79
PVT1-201ENST00000504719 PPIP5K2O43314 1243 aa32.48■■■□□ 2.79
PVT1-201ENST00000504719 EIF6P56537 245 aaKnown RBP32.48■■■□□ 2.79
PVT1-201ENST00000504719 NEXNQ0ZGT2 675 aa32.47■■■□□ 2.79
PVT1-201ENST00000504719 FLIIQ13045 1269 aa32.47■■■□□ 2.79
PVT1-201ENST00000504719 AOC3Q16853 763 aa32.47■■■□□ 2.79
PVT1-201ENST00000504719 GPC2Q8N158 579 aa32.47■■■□□ 2.79
PVT1-201ENST00000504719 JARID2Q92833 1246 aaPredicted RBP32.47■■■□□ 2.79
PVT1-201ENST00000504719 ZNF521Q96K83 1311 aa32.47■■■□□ 2.79
PVT1-201ENST00000504719 PDE8AO60658 829 aa32.46■■■□□ 2.79
PVT1-201ENST00000504719 NIM1KQ8IY84 436 aa32.46■■■□□ 2.79
PVT1-201ENST00000504719 TAF1DQ9H5J8 278 aaPredicted RBP32.46■■■□□ 2.79
PVT1-201ENST00000504719 CDHR2Q9BYE9 1310 aa32.45■■■□□ 2.78
PVT1-201ENST00000504719 POTEIP0CG38 1075 aa32.43■■■□□ 2.78
PVT1-201ENST00000504719 POTEJP0CG39 1038 aa32.43■■■□□ 2.78
PVT1-201ENST00000504719 HACL1Q9UJ83 578 aa32.43■■■□□ 2.78
PVT1-201ENST00000504719 DUOX1Q9NRD9 1551 aa32.43■■■□□ 2.78
PVT1-201ENST00000504719 MYH3P11055 1940 aa32.42■■■□□ 2.78
PVT1-201ENST00000504719 NEURL1BA8MQ27 555 aa32.42■■■□□ 2.78
PVT1-201ENST00000504719 RPS8P62241 208 aaKnown RBP32.42■■■□□ 2.78
PVT1-201ENST00000504719 CWF19L2Q2TBE0 894 aaKnown RBP32.42■■■□□ 2.78
PVT1-201ENST00000504719 KIAA2012Q0VF49 1180 aa32.41■■■□□ 2.78
PVT1-201ENST00000504719 FKBP5Q13451 457 aaPredicted RBP32.41■■■□□ 2.78
PVT1-201ENST00000504719 CCDC152Q4G0S7 254 aa32.41■■■□□ 2.78
PVT1-201ENST00000504719 CHADLQ6NUI6 762 aa32.41■■■□□ 2.78
PVT1-201ENST00000504719 SEC31BQ9NQW1 1179 aa32.41■■■□□ 2.78
PVT1-201ENST00000504719 GJA3Q9Y6H8 435 aa32.41■■■□□ 2.78
PVT1-201ENST00000504719 DNAJC5GQ8N7S2 189 aa32.4■■■□□ 2.78
PVT1-201ENST00000504719 HTRA3P83110 453 aa32.39■■■□□ 2.78
PVT1-201ENST00000504719 DNAAF4Q8WXU2 420 aa32.39■■■□□ 2.78
PVT1-201ENST00000504719 ZNRF3Q9ULT6 936 aa32.39■■■□□ 2.78
PVT1-201ENST00000504719 EPHX2P34913 555 aa32.38■■■□□ 2.77
PVT1-201ENST00000504719 LDHDQ86WU2 507 aa32.38■■■□□ 2.77
PVT1-201ENST00000504719 NSFL1CQ9UNZ2 370 aaKnown RBP32.38■■■□□ 2.77
PVT1-201ENST00000504719 LTBP1Q14766 1721 aa32.37■■■□□ 2.77
PVT1-201ENST00000504719 H7C1W4 665 aa32.37■■■□□ 2.77
PVT1-201ENST00000504719 GPSM2P81274 684 aa32.37■■■□□ 2.77
PVT1-201ENST00000504719 CCDC85AQ96PX6 553 aaPredicted RBP32.37■■■□□ 2.77
PVT1-201ENST00000504719 ADAMTSL1Q8N6G6 1762 aa32.37■■■□□ 2.77
PVT1-201ENST00000504719 CTSWP56202 376 aa32.35■■■□□ 2.77
PVT1-201ENST00000504719 GCKRQ14397 625 aa32.35■■■□□ 2.77
PVT1-201ENST00000504719 EAPPQ56P03 285 aaPredicted RBP32.35■■■□□ 2.77
PVT1-201ENST00000504719 CXCL9Q07325 125 aa32.34■■■□□ 2.77
PVT1-201ENST00000504719 POLLQ9UGP5 575 aa32.34■■■□□ 2.77
PVT1-201ENST00000504719 SCNN1DP51172 638 aa32.33■■■□□ 2.77
PVT1-201ENST00000504719 UBE3BQ7Z3V4 1068 aa32.33■■■□□ 2.77
PVT1-201ENST00000504719 PNMA8AQ86V59 439 aaPredicted RBP32.33■■■□□ 2.77
PVT1-201ENST00000504719 LINS1Q8NG48 757 aa32.33■■■□□ 2.77
PVT1-201ENST00000504719 TTLL11Q8NHH1 800 aa32.33■■■□□ 2.77
PVT1-201ENST00000504719 LMOD1P29536 600 aaPredicted RBP32.32■■■□□ 2.76
PVT1-201ENST00000504719 WASHC4Q2M389 1173 aa32.32■■■□□ 2.76
PVT1-201ENST00000504719 C6orf229H3BNL8 230 aa32.31■■■□□ 2.76
PVT1-201ENST00000504719 PODXL2Q9NZ53 605 aa32.31■■■□□ 2.76
PVT1-201ENST00000504719 EPS15P42566 896 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 CASP7P55210 303 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 CIAPIN1Q6FI81 312 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 ANKRD18AQ8IVF6 992 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 TBC1D16Q8TBP0 767 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 PLA2G12BQ9BX93 195 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 CLEC11AQ9Y240 323 aa32.3■■■□□ 2.76
PVT1-201ENST00000504719 YDJCA8MPS7 323 aa32.29■■■□□ 2.76
PVT1-201ENST00000504719 E9PSI1 815 aa32.29■■■□□ 2.76
PVT1-201ENST00000504719 F6X3S4 739 aa32.29■■■□□ 2.76
PVT1-201ENST00000504719 EYA3Q99504 573 aa32.29■■■□□ 2.76
PVT1-201ENST00000504719 KLRG1Q96E93 195 aa32.28■■■□□ 2.76
PVT1-201ENST00000504719 CDC5LQ99459 802 aaKnown RBP32.28■■■□□ 2.76
PVT1-201ENST00000504719 GREM2Q9H772 168 aa32.28■■■□□ 2.76
PVT1-201ENST00000504719 RTL9Q8NET4 1388 aa32.28■■■□□ 2.76
PVT1-201ENST00000504719 SPEF2Q9C093 1822 aa32.28■■■□□ 2.76
PVT1-201ENST00000504719 RIMBP2O15034 1052 aa32.27■■■□□ 2.76
PVT1-201ENST00000504719 RAD17O75943 681 aa32.27■■■□□ 2.76
PVT1-201ENST00000504719 TNIP1Q15025 636 aa32.27■■■□□ 2.76
PVT1-201ENST00000504719 BEND3Q5T5X7 828 aa32.27■■■□□ 2.76
PVT1-201ENST00000504719 ANKIB1Q9P2G1 1089 aa32.26■■■□□ 2.75
PVT1-201ENST00000504719 PASKQ96RG2 1323 aa32.26■■■□□ 2.75
PVT1-201ENST00000504719 ITGBL1O95965 494 aaPredicted RBP32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 935.9 ms