RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PRELPP51888 382 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 WWC1Q8IX03 1113 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 CNBD1Q8NA66 436 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 WDR70Q9NW82 654 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 CHPF2Q9P2E5 772 aa10.43□□□□□ -0.74
RFC1-207ENST00000504554 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
RFC1-207ENST00000504554 ANKRD31Q8N7Z5 1873 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
RFC1-207ENST00000504554 GPTP24298 496 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 AIMP1Q12904 312 aaKnown RBP10.42□□□□□ -0.74
RFC1-207ENST00000504554 CCDC27Q2M243 656 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 SUSD4Q5VX71 490 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 KIF6Q6ZMV9 814 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 COPS6Q7L5N1 327 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 NBPF5PQ86XG9 351 aaPredicted RBP10.42□□□□□ -0.74
RFC1-207ENST00000504554 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ZNF34Q8IZ26 560 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
RFC1-207ENST00000504554 LHX6Q9UPM6 363 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ZNF652Q9Y2D9 606 aa10.42□□□□□ -0.74
RFC1-207ENST00000504554 ATP10DQ9P241 1426 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
RFC1-207ENST00000504554 H0YIN7 160 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 GNAI1P63096 354 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
RFC1-207ENST00000504554 SLC51AQ86UW1 340 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
RFC1-207ENST00000504554 ZNF622Q969S3 477 aaKnown RBP eCLIP10.41□□□□□ -0.745e-7■■■■□ 19.5
RFC1-207ENST00000504554 DDX21Q9NR30 783 aaKnown RBP eCLIP10.41□□□□□ -0.74
RFC1-207ENST00000504554 KLRG2A4D1S0 409 aaPredicted RBP10.4□□□□□ -0.74
RFC1-207ENST00000504554 NTSR2O95665 410 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 HOXB7P09629 217 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 SRGNP10124 158 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 PDE6BP35913 854 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 ST5P78524 1137 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 LSM11P83369 360 aaKnown RBP eCLIP10.4□□□□□ -0.74
RFC1-207ENST00000504554 RASSF7Q02833 373 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 TTLL6Q8N841 843 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 ZNF428Q96B54 188 aa10.4□□□□□ -0.74
RFC1-207ENST00000504554 CHD4Q14839 1912 aa10.39□□□□□ -0.75
RFC1-207ENST00000504554 NFKBIEO00221 500 aa10.39□□□□□ -0.75
RFC1-207ENST00000504554 TPTE2Q6XPS3 522 aa10.39□□□□□ -0.75
RFC1-207ENST00000504554 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
RFC1-207ENST00000504554 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
RFC1-207ENST00000504554 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
RFC1-207ENST00000504554 TCERG1O14776 1098 aaKnown RBP10.38□□□□□ -0.75
RFC1-207ENST00000504554 NPHP1O15259 732 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 C21orf2O43822 256 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
RFC1-207ENST00000504554 C9orf131Q5VYM1 1079 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 OLFM4Q6UX06 510 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 KCNV2Q8TDN2 545 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 ZNF526Q8TF50 670 aaPredicted RBP10.38□□□□□ -0.75
RFC1-207ENST00000504554 MASTLQ96GX5 879 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 DLEC1Q9Y238 1755 aa10.38□□□□□ -0.75
RFC1-207ENST00000504554 STYK1Q6J9G0 422 aa10.37□□□□□ -0.75
RFC1-207ENST00000504554 PRPF40BQ6NWY9 871 aaKnown RBP10.37□□□□□ -0.75
RFC1-207ENST00000504554 NLRP10Q86W26 655 aa10.37□□□□□ -0.75
RFC1-207ENST00000504554 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
RFC1-207ENST00000504554 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
RFC1-207ENST00000504554 ARFGEF1Q9Y6D6 1849 aa10.37□□□□□ -0.75
RFC1-207ENST00000504554 IL16Q14005 1332 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 NUP98P52948 1817 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 PBX2P40425 430 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 TCIRG1Q13488 830 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 CRY2Q49AN0 593 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 NYXQ9GZU5 481 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
RFC1-207ENST00000504554 IBTKQ9P2D0 1353 aaPredicted RBP10.36□□□□□ -0.75
RFC1-207ENST00000504554 ATP5J2-PTCD1G3V325 749 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 NPR1P16066 1061 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 GTF2E1P29083 439 aaPredicted RBP10.35□□□□□ -0.75
RFC1-207ENST00000504554 FOXK1P85037 733 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 G2E3Q7L622 706 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 CNKSR1Q969H4 720 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 ISCA1Q9BUE6 129 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 UTP14AQ9BVJ6 771 aaKnown RBP10.35□□□□□ -0.75
RFC1-207ENST00000504554 HYPKQ9NX55 129 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 RNF181Q9P0P0 153 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
RFC1-207ENST00000504554 ZNF521Q96K83 1311 aa10.34□□□□□ -0.75
RFC1-207ENST00000504554 HCLS1P14317 486 aaPredicted RBP10.34□□□□□ -0.75
RFC1-207ENST00000504554 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
RFC1-207ENST00000504554 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
RFC1-207ENST00000504554 PPP1R42Q7Z4L9 355 aa10.34□□□□□ -0.75
RFC1-207ENST00000504554 WDR63Q8IWG1 891 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms