RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
DHFR-202ENST00000504396 AIDAQ96BJ3 306 aa12.13□□□□□ -0.47
DHFR-202ENST00000504396 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
DHFR-202ENST00000504396 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
DHFR-202ENST00000504396 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
DHFR-202ENST00000504396 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
DHFR-202ENST00000504396 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
DHFR-202ENST00000504396 SRGNP10124 158 aa12.12□□□□□ -0.47
DHFR-202ENST00000504396 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
DHFR-202ENST00000504396 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
DHFR-202ENST00000504396 KCNQ3O43525 872 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 SCN4AP35499 1836 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
DHFR-202ENST00000504396 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
DHFR-202ENST00000504396 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
DHFR-202ENST00000504396 EVI5O60447 810 aa12.1□□□□□ -0.47
DHFR-202ENST00000504396 NPR1P16066 1061 aa12.1□□□□□ -0.47
DHFR-202ENST00000504396 GTF2E1P29083 439 aaPredicted RBP12.1□□□□□ -0.47
DHFR-202ENST00000504396 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
DHFR-202ENST00000504396 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
DHFR-202ENST00000504396 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
DHFR-202ENST00000504396 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
DHFR-202ENST00000504396 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
DHFR-202ENST00000504396 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
DHFR-202ENST00000504396 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
DHFR-202ENST00000504396 FOXN1O15353 648 aa12.09□□□□□ -0.47
DHFR-202ENST00000504396 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
DHFR-202ENST00000504396 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
DHFR-202ENST00000504396 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.471e-7■■□□□ 13.5
DHFR-202ENST00000504396 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
DHFR-202ENST00000504396 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
DHFR-202ENST00000504396 OLFM4Q6UX06 510 aa12.08□□□□□ -0.48
DHFR-202ENST00000504396 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
DHFR-202ENST00000504396 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
DHFR-202ENST00000504396 PASKQ96RG2 1323 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 EPHX2P34913 555 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
DHFR-202ENST00000504396 VEGFBP49765 207 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 CLEC4GQ6UXB4 293 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 MCM10Q7L590 875 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 SPNS2Q8IVW8 549 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
DHFR-202ENST00000504396 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
DHFR-202ENST00000504396 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
DHFR-202ENST00000504396 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
DHFR-202ENST00000504396 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
DHFR-202ENST00000504396 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
DHFR-202ENST00000504396 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
DHFR-202ENST00000504396 DPYSL4O14531 572 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
DHFR-202ENST00000504396 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
DHFR-202ENST00000504396 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
DHFR-202ENST00000504396 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 JDP2Q8WYK2 163 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
DHFR-202ENST00000504396 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 LMOD1P29536 600 aaPredicted RBP12.04□□□□□ -0.48
DHFR-202ENST00000504396 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 LBX1P52954 281 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 GRM1Q13255 1194 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
DHFR-202ENST00000504396 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 EIF6P56537 245 aaKnown RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 CNTROBQ8N137 903 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 E2F4Q16254 413 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 HLFQ16534 295 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
DHFR-202ENST00000504396 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 GPC2Q8N158 579 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 NBPF15Q8N660 670 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
DHFR-202ENST00000504396 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
DHFR-202ENST00000504396 NEFMP07197 916 aa12.02□□□□□ -0.49
DHFR-202ENST00000504396 PBX2P40425 430 aa12.02□□□□□ -0.49
DHFR-202ENST00000504396 KIF6Q6ZMV9 814 aa12.02□□□□□ -0.49
DHFR-202ENST00000504396 MIS18AQ9NYP9 233 aa12.02□□□□□ -0.49
DHFR-202ENST00000504396 ABCC12Q96J65 1359 aa12.01□□□□□ -0.49
DHFR-202ENST00000504396 WDR33Q9C0J8 1336 aaKnown RBP12.01□□□□□ -0.49
DHFR-202ENST00000504396 RASSF10A6NK89 507 aa12.01□□□□□ -0.49
DHFR-202ENST00000504396 FZD9O00144 591 aa12.01□□□□□ -0.49
DHFR-202ENST00000504396 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
DHFR-202ENST00000504396 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
DHFR-202ENST00000504396 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms