RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PLIN1O60240 522 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 C21orf2O43822 256 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 HSP90B1P14625 803 aaKnown RBP20.82■□□□□ 0.92
SCLT1-205ENST00000503401 ALDH1B1P30837 517 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 CTSWP56202 376 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 DDX46Q7L014 1031 aaKnown RBP20.82■□□□□ 0.92
SCLT1-205ENST00000503401 USP44Q9H0E7 712 aa20.82■□□□□ 0.92
SCLT1-205ENST00000503401 RLBP1P12271 317 aa20.81■□□□□ 0.92
SCLT1-205ENST00000503401 INTS3Q68E01 1043 aaKnown RBP20.81■□□□□ 0.92
SCLT1-205ENST00000503401 TMEM57Q8N5G2 664 aa20.81■□□□□ 0.92
SCLT1-205ENST00000503401 EPHA10Q5JZY3 1008 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 FTSJ3Q8IY81 847 aaKnown RBP20.8■□□□□ 0.92
SCLT1-205ENST00000503401 TTLL11Q8NHH1 800 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 SUCLG2Q96I99 432 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 CRAMP1Q96RY5 1269 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 SEC31BQ9NQW1 1179 aa20.8■□□□□ 0.92
SCLT1-205ENST00000503401 UTYO14607 1347 aa20.79■□□□□ 0.92
SCLT1-205ENST00000503401 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
SCLT1-205ENST00000503401 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
SCLT1-205ENST00000503401 GREM2Q9H772 168 aa20.79■□□□□ 0.92
SCLT1-205ENST00000503401 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 FOXO4P98177 505 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 ARHGAP27Q6ZUM4 889 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 PANK1Q8TE04 598 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 CELF1Q92879 486 aaKnown RBP20.78■□□□□ 0.92
SCLT1-205ENST00000503401 KAZALD1Q96I82 304 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 GRAPQ13588 217 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
SCLT1-205ENST00000503401 C7orf43Q8WVR3 580 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 MEIS3Q99687 375 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 SPEF2Q9C093 1822 aa20.78■□□□□ 0.92
SCLT1-205ENST00000503401 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
SCLT1-205ENST00000503401 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
SCLT1-205ENST00000503401 CHMP3Q9Y3E7 222 aa20.76■□□□□ 0.91
SCLT1-205ENST00000503401 CSF1RP07333 972 aa20.75■□□□□ 0.91
SCLT1-205ENST00000503401 LMBR1LQ6UX01 489 aa20.75■□□□□ 0.91
SCLT1-205ENST00000503401 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
SCLT1-205ENST00000503401 BICC1Q9H694 974 aaKnown RBP20.75■□□□□ 0.91
SCLT1-205ENST00000503401 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
SCLT1-205ENST00000503401 CHD4Q14839 1912 aa20.75■□□□□ 0.91
SCLT1-205ENST00000503401 UBTFL1P0CB47 393 aaPredicted RBP20.75■□□□□ 0.91
SCLT1-205ENST00000503401 ITGA6P23229 1130 aa20.74■□□□□ 0.91
SCLT1-205ENST00000503401 RASSF7Q02833 373 aa20.74■□□□□ 0.91
SCLT1-205ENST00000503401 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
SCLT1-205ENST00000503401 BBOX1O75936 387 aa20.73■□□□□ 0.91
SCLT1-205ENST00000503401 RPS8P62241 208 aaKnown RBP20.73■□□□□ 0.91
SCLT1-205ENST00000503401 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
SCLT1-205ENST00000503401 SBF1O95248 1867 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 NFKBIEO00221 500 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 CCDC93Q567U6 631 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 ANKRD44Q8N8A2 993 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
SCLT1-205ENST00000503401 RTL9Q8NET4 1388 aa20.72■□□□□ 0.91
SCLT1-205ENST00000503401 SOGA3Q5TF21 947 aa20.71■□□□□ 0.91
SCLT1-205ENST00000503401 ANKRD18AQ8IVF6 992 aa20.71■□□□□ 0.91
SCLT1-205ENST00000503401 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
SCLT1-205ENST00000503401 CDC5LQ99459 802 aaKnown RBP20.71■□□□□ 0.91
SCLT1-205ENST00000503401 RABL6Q3YEC7 729 aaPredicted RBP20.7■□□□□ 0.9
SCLT1-205ENST00000503401 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
SCLT1-205ENST00000503401 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
SCLT1-205ENST00000503401 SNED1Q8TER0 1413 aa20.7■□□□□ 0.9
SCLT1-205ENST00000503401 ANKRD18BA2A2Z9 1011 aa20.69■□□□□ 0.9
SCLT1-205ENST00000503401 GNAI3P08754 354 aa20.69■□□□□ 0.9
SCLT1-205ENST00000503401 MS4A1P11836 297 aa20.69■□□□□ 0.9
SCLT1-205ENST00000503401 PRELPP51888 382 aa20.69■□□□□ 0.9
SCLT1-205ENST00000503401 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
SCLT1-205ENST00000503401 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
SCLT1-205ENST00000503401 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
SCLT1-205ENST00000503401 RRP1P56182 461 aaKnown RBP20.68■□□□□ 0.9
SCLT1-205ENST00000503401 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
SCLT1-205ENST00000503401 TAOK3Q9H2K8 898 aa20.68■□□□□ 0.9
SCLT1-205ENST00000503401 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
SCLT1-205ENST00000503401 TMX4Q9H1E5 349 aaPredicted RBP20.67■□□□□ 0.9
SCLT1-205ENST00000503401 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
SCLT1-205ENST00000503401 ZBTB7BO15156 539 aaPredicted RBP20.67■□□□□ 0.9
SCLT1-205ENST00000503401 IGHMBP2P38935 993 aaKnown RBP20.67■□□□□ 0.9
SCLT1-205ENST00000503401 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
SCLT1-205ENST00000503401 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
SCLT1-205ENST00000503401 TMC4Q7Z404 712 aa20.67■□□□□ 0.9
SCLT1-205ENST00000503401 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCLT1-205ENST00000503401 TAF7LQ5H9L4 462 aa20.66■□□□□ 0.9
SCLT1-205ENST00000503401 ZNF277Q9NRM2 450 aaPredicted RBP20.66■□□□□ 0.9
SCLT1-205ENST00000503401 GNAI2P04899 355 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 GPSM2P81274 684 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 PDE3AQ14432 1141 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 DPP8Q6V1X1 898 aaPredicted RBP20.65■□□□□ 0.9
SCLT1-205ENST00000503401 MPNDQ8N594 471 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 KLHDC4Q8TBB5 520 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
SCLT1-205ENST00000503401 BSDC1Q9NW68 430 aaPredicted RBP20.65■□□□□ 0.9
SCLT1-205ENST00000503401 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
SCLT1-205ENST00000503401 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.9
SCLT1-205ENST00000503401 DUOX1Q9NRD9 1551 aa20.64■□□□□ 0.89
SCLT1-205ENST00000503401 RNF181Q9P0P0 153 aa20.64■□□□□ 0.89
SCLT1-205ENST00000503401 MINPP1Q9UNW1 487 aa20.64■□□□□ 0.89
SCLT1-205ENST00000503401 HDAC5Q9UQL6 1122 aa20.64■□□□□ 0.89
SCLT1-205ENST00000503401 LTBP3Q9NS15 1303 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms